Gene Information

Name : RB11030 (RB11030)
Accession : NP_869748.1
Strain : Rhodopirellula baltica SH 1
Genome accession: NC_005027
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5980074 - 5980829 bp
Length : 756 bp
Strand : -
Note : PMID: 9389475 best DB hits: BLAST: gb:AAB89781.1; (AE001001) ABC transporter ATP-binding protein; E=2e-46 embl:CAB89461.1; (AL354048) ABC transporter ATP-binding; E=2e-45 embl:CAC10293.1; (AL442629) ABC transport system ATP; E=3e-45 COG: AF1469; COG1136 A

DNA sequence : 
GTGCCTTCAAACAACACACCGCCGCTGCAAATCGATCAAGTTCACAAGACTTATCGCCAAGGCAATTCGACCGTGCACGC
GTTGGACGGAGTGAACCTGACCGTCCAACCCGGCGAATTCGTGGCGATCATGGGTGCCTCCGGATCAGGAAAAAGCACAC
TGCTTCATGCGATGGCAGGGCTGATTCAGGTCGACGCAGGACAGGTGTCCATCGCGGGACAAGACCTCTCCAAGTTGAAT
GACGCCGCTCTCACCAAGTTTCGTCGAAAGAACCTGGGGATCGTCTTCCAAGCCTACAACTTGATCCCGGCATTGACGGC
GGAAGAGAACATTCGACTCCCCGCGAATGAGACAGCCGACTTAGACGATCGTGTCGAACATCTGCTGGAACGACTCGAGA
TGAACGAGCGACGATCGCATCGACCGATGGCTCTTTCCGGTGGCGAGCAACAACGCATCGCGATTGCGAGAGCCCTGGTT
TGCGATCCGGCAATCCTGCTGGCCGACGAACCCACCGGCAGTCTGGATTCCGCCACCGGAACGTCCATCTGCCGACTGCT
AAGAAACCTCGTCGATGAAGAACGACGCAGCATCGTGGTCGTCACCCATGAACCTCATGTCGCGATGTGGGCTGATCGCG
TGGTGGTGATGAAAGATGGCACCGACTTGACCGAGTTCAAAACGGACGGCATCCGAGATCCTCAAACCGTTGCCAGTCGT
TACCAGCAATCACTTGGTGCGGAGGCGGTGCATTGA

Protein sequence : 
MPSNNTPPLQIDQVHKTYRQGNSTVHALDGVNLTVQPGEFVAIMGASGSGKSTLLHAMAGLIQVDAGQVSIAGQDLSKLN
DAALTKFRRKNLGIVFQAYNLIPALTAEENIRLPANETADLDDRVEHLLERLEMNERRSHRPMALSGGEQQRIAIARALV
CDPAILLADEPTGSLDSATGTSICRLLRNLVDEERRSIVVVTHEPHVAMWADRVVVMKDGTDLTEFKTDGIRDPQTVASR
YQQSLGAEAVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-36 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RB11030 NP_869748.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-43 45
RB11030 NP_869748.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 7e-41 44
RB11030 NP_869748.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 9e-37 43
RB11030 NP_869748.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-41 42