Gene Information

Name : RB11021 (RB11021)
Accession : NP_869744.1
Strain : Rhodopirellula baltica SH 1
Genome accession: NC_005027
Putative virulence/resistance : Resistance
Product : ABC transport system ATP binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5974498 - 5975385 bp
Length : 888 bp
Strand : -
Note : PMID: 8843436 best DB hits: BLAST: embl:CAC10293.1; (AL442629) ABC transport system ATP; E=3e-49 embl:CAB81857.1; (AL161691) ABC-transporter ATP-binding; E=6e-48 embl:CAB89461.1; (AL354048) ABC transporter ATP-binding; E=5e-47 COG: AF1469; COG1136 ABC-typ

DNA sequence :
TTGCATGCGTTGCCCATGGCACGGCCCGTGCTTAGTCAAAGCATGATCCATCGCTCAACCACTCTTGTGACCGACTCAAT
GCCGCCAATCACGCCACCCATGTCCGTGCCTGAATGTTCTCAACCAGCAACCGCCACGGTTCAGTCCGTTTCTAAAACCT
ATCGGCAAGGCGTTCGCCAAGTCGATGCGTTGCGTGAAGTCAGCCTCAACATTGAATCAGGATCTTTCGTCGCGGTCATG
GGAGCCAGCGGATCGGGCAAGAGCACGTTGTTGCACCTGATGAGCGGACTGACTCGCCCGACATCGGGTTCCGTTCTGAT
TGAAGGCCAAAACATCGCCGACCTGACTGACTATGAACTGACCTGCTTTCGCCGTAAGCGGATTGGATTGGTGTTCCAAG
CATTCAACTTGGTTCCGTCTCTATCAGCGAGAGACAACATACTGTTTCCGCTTTATGCCGCTGGAGAAAGCTTGAATGAC
GAATCCGAACTGACCGAACTGGCTCAACCATTGGGGATCGCTGATCGCTTGGATCATCGCCCGGACGCTCTCAGCGGAGG
CGAACAACAACGTGTTGCGATCGCACGATCGCTGATCACCAACCCAGCCATCGTGTTCGCCGATGAACCCACCGGAAGCT
TGGATTCCGTGACCGGCGACTCGATCTGCAAACTGTTGCGAAACCTCTGCGATCAACAACAACGAACCATCGTGATGGTC
ACTCACGAACCCAGCGTTGCGATTTGGGCGGACAGCGTCGTCGTGCTCAAAGACGGCCAAATCGTGAACCAATTCCTGAC
GAACGAGTGCACGGATGCCCAGTCGCTGGCAGCTCGATATCAGCAGGTTGTCTCGATCGGTGGCCAGGAAATGCTCCACT
CGGCCTGA

Protein sequence :
MHALPMARPVLSQSMIHRSTTLVTDSMPPITPPMSVPECSQPATATVQSVSKTYRQGVRQVDALREVSLNIESGSFVAVM
GASGSGKSTLLHLMSGLTRPTSGSVLIEGQNIADLTDYELTCFRRKRIGLVFQAFNLVPSLSARDNILFPLYAAGESLND
ESELTELAQPLGIADRLDHRPDALSGGEQQRVAIARSLITNPAIVFADEPTGSLDSVTGDSICKLLRNLCDQQQRTIVMV
THEPSVAIWADSVVVLKDGQIVNQFLTNECTDAQSLAARYQQVVSIGGQEMLHSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-33 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-33 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RB11021 NP_869744.1 ABC transport system ATP binding protein CP001581.1.gene598.p Protein 5e-44 47
RB11021 NP_869744.1 ABC transport system ATP binding protein NC_008702.1.4606598. Protein 2e-37 47
RB11021 NP_869744.1 ABC transport system ATP binding protein CP001581.1.gene798.p Protein 6e-44 46
RB11021 NP_869744.1 ABC transport system ATP binding protein NC_012469.1.7686878. Protein 3e-41 43