Gene Information

Name : pykA (RB10277)
Accession : NP_869344.1
Strain : Rhodopirellula baltica SH 1
Genome accession: NC_005027
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : -
Position : 5555414 - 5556844 bp
Length : 1431 bp
Strand : +
Note : PMID: 9387221 best DB hits: BLAST: ddbj:BAB06882.1; (AP001517) pyruvate kinase [Bacillus halodurans]; E=4e-82 swissprot:P80885; KPYK_BACSU PYRUVATE KINASE (PK) (VEGETATIVE; E=6e-80 swissprot:P51181; KPYK_BACLI PYRUVATE KINASE (PK) ----- pir:; E=1e-79 COG:

DNA sequence :
GTGCAGGACTACCGTCACACAAAAATCATTGCCACGATCGGCCCGGCAACCGAGTCCCCCGAAAAACTAGCGGCGTTGAT
CGAAGCGGGCGTCGATGTCATGCGACTCAATATGGCACACGGAACGCCTGAATGGGTCGGCGAAATCGTCGCACGGATCC
GAAAGGTTTCCAAGGATATTAGTCGTCACGTTGCGGTGATGATGGACGTCAAAGGCCCAGAGATTCGAACCGGTGCGGTG
GAGGATGCGATCGAATTGAAAGCCGGCGACGAGCTGGTCCTGTTCACCGAAGACTGCGCGGATCAATCGGCGGTCGAATC
CGACGGAACTCCGCGGGTCAGTGTGAACTATCTGGGCCTGCCCGGTGCGATCGACTTGGACAGCACGATTTTGGTCGACA
GCGGTTTGTTGCATTGGCATGTACTGAAGAAAGACGCCACCACCGTTCGCTGCCGCGTGATCACGCCCGGCGTTCTGGAA
TCTCGACGTCACATCAACTTGCCTGGCGTCCAAGTCAACTTGCCCGCGATCACGGACAAAGACCGCACCGATTTGGCGGC
GGGCGTCAAAGCGGGCATCGACTTCGTTGCGCTTTCGTTTGTTCGCCAAGCGGAAGACGTCCGCACGCTGCGTGCATTCT
TAGACGAACACGGCTCACCCGCACGAATCATTTCAAAGATCGAAGACCAAGCCGGTGTTCGCAACATGAAGGCGATCATC
CGGCAATCCGATGCGATCATGGTCGCTCGTGGTGACCTCGGCGTTGAAATTGATTACCACCGATTGCCGCTTGTTCAAAC
CGATTTGATTCGTGCCTGCCAAGAAGATGGCAAGCCCGTCATCATCGCCACGCACCTGCTCGAGTCGATGATTCAATCGC
CGGTTCCAACTCGTGCGGAAGTGTCGGACGTCTCCAACGCAATTCGCGAACAAGCCGATGCGGTGATGCTGTCTGGTGAA
ACGACCACGGGTAAATACCCGCTGGAGTCCGTTGGTGTGCTGCAAAACATTGTCGCCAGCATCGAGCCAACGGTCAGCCG
CCAACTGAACTCAAAGATCGTGCTTCGAGAGCCCAAATCGATGATGCTGCGATCGGCGTGCACCTTGGCACAGGAGATGG
GTGATTCAGGAATCGTTGTCTTCACCCGCAGCGGTTTTCTCGCTTACGTCCTGGGGGCCCTGAGGCCTCGGGGTGTGCCA
ATTTTCGCCTTCACCGATGTCGAGCATACGTTCCGTCACTTAATGTTGCCGTGGGGTGTGGAGCCGTTCTTCATGGAGTT
CTCCGAAGATCACGATCAAACCATCACCAACGCATTGGAAGTTCTGAAGGAGAGCGGTTGGTGCAAACCGGGCGTTTGGT
TGGGGGTCATCACCAACGCTTTGGCCGACGAAAAAATCATCGACACGCTTCAGTTGCGTCAGGTCCAGTAA

Protein sequence :
MQDYRHTKIIATIGPATESPEKLAALIEAGVDVMRLNMAHGTPEWVGEIVARIRKVSKDISRHVAVMMDVKGPEIRTGAV
EDAIELKAGDELVLFTEDCADQSAVESDGTPRVSVNYLGLPGAIDLDSTILVDSGLLHWHVLKKDATTVRCRVITPGVLE
SRRHINLPGVQVNLPAITDKDRTDLAAGVKAGIDFVALSFVRQAEDVRTLRAFLDEHGSPARIISKIEDQAGVRNMKAII
RQSDAIMVARGDLGVEIDYHRLPLVQTDLIRACQEDGKPVIIATHLLESMIQSPVPTRAEVSDVSNAIREQADAVMLSGE
TTTGKYPLESVGVLQNIVASIEPTVSRQLNSKIVLREPKSMMLRSACTLAQEMGDSGIVVFTRSGFLAYVLGALRPRGVP
IFAFTDVEHTFRHLMLPWGVEPFFMEFSEDHDQTITNALEVLKESGWCKPGVWLGVITNALADEKIIDTLQLRQVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 4e-63 43
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-62 43
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 4e-63 41
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 4e-63 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykA NP_869344.1 pyruvate kinase VFG0479 Protein 1e-63 41