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Name : pyn (RB10231) Accession : NP_869320.1 Strain : Rhodopirellula baltica SH 1 Genome accession: NC_005027 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase (PYNP) Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 5528046 - 5529317 bp Length : 1272 bp Strand : + Note : PMID: 8987664 PMID: 9817849 PMID: 8987664 best DB hits: BLAST: pdb:1BRW; B Chain B, The Crystal Structure Of Pyrimidine; E=3e-70 swissprot:P77836; PDP_BACST PYRIMIDINE-NUCLEOSIDE PHOSPHORYLASE; E=3e-69 swissprot:O53366; DEOA_MYCTU THYMIDINE PHOSPHORYLASE DNA sequence : ATGCTGACCGCCAATTTGATCCGGACCAAGCGGGACGGCGGGGTCCTGAACGCCGAGCAATGGCGATTCCTGATTGAGGG CTACTGTGGCGGTGAGGTCACGGATTACCAAATGTCCGCCCTCGCGATGGCAATCTTCTTTCGCGGCTTGGATCGACGCG AAACGGCTGAGCTGACCCGGTGCATGGTCGACAGTGGTGAACGTCTGCCCCGGGTCAGTGATCGACCTCGAGTCGACAAG CACAGCACCGGAGGGCTGGGCGACAAAGTCTCGCTGATCTTGGCTCCGCTGCTGGCCTGCTGCGATGTGGACGTGCCGAT GATCAGTGGCCGTGGCCTTGGGCGAACCGGTGGGACGCTCGACAAGCTCGAATCGATCCCGGGCTACCAAACGCAGCTGT CGATCGAACAATCCAGCCGAGTCCTGAAGGATGTGGGTTGCTTCATCGTGGGAGCCACCGAGTCAATCGCACCAGCGGAT CGCCGTTTGTATGGACTGCGAGACGTCACAGCCACAGTCGAATCCGTGGGGCTGATCACGGCCAGCATTCTCAGCAAGAA GCTGGCGGCAAGCTTGGATGCCCTGGTGATGGATGTGAAGGTTGGATCGGCTGGCTTCATGCCAAGCATTCAGCAGGCAA CCGAGTTGGCCGACTCGCTTCGAGAAGTGGGCGTAGAAGCGGGTTTGCCGACCATTCCCGTCCTGTCTGACATGGATCAA CCACTCGGACGAGCCATCGGAAATGCGAACGAGGTCAACGAGTCTCTTGATGTACTCGATGGCGGTGGGCCGGAAGAAGT GCGAGCATTGACGTTGCGATTGTCGGCGGAGTTGCTGGTGGCAACGAAGCAAGCTGGCGATCTGCAAACGGCGGAGGGGT TGTTGGCTCGCAAACTCGATTCGGGTGAAGCGAGGCAACGATTTGAACGCATGGTGCACGAACAGGGCGGCAAGCTTTCC GGTCATCTGCCGCTGGGCAAACAACGCGACACCGTCGCGGAGCGATCCGGATGGGTTGAATCGATTGATTGCCCCGCCAT CGGCGATGCGATCATTTCGATGGGCGGTGGTCGACGCAAAACAACTGATCCCGTGGAACCGTCCGTTGGAATTGATTTGC ACTTTCGCGTTGGCGACCGTGTCGAAACGGGCCAACCGCTTTGGACGGTTTATGAAGGTCAAGTCGCTTGCCCGCCGATC CAACCCGTTCGAATGTCGGAAACAAGCGTCCCGGCTCGGCCGTTGATCCTGCAGCGAAAGTCCGGCGGTTGA Protein sequence : MLTANLIRTKRDGGVLNAEQWRFLIEGYCGGEVTDYQMSALAMAIFFRGLDRRETAELTRCMVDSGERLPRVSDRPRVDK HSTGGLGDKVSLILAPLLACCDVDVPMISGRGLGRTGGTLDKLESIPGYQTQLSIEQSSRVLKDVGCFIVGATESIAPAD RRLYGLRDVTATVESVGLITASILSKKLAASLDALVMDVKVGSAGFMPSIQQATELADSLREVGVEAGLPTIPVLSDMDQ PLGRAIGNANEVNESLDVLDGGGPEEVRALTLRLSAELLVATKQAGDLQTAEGLLARKLDSGEARQRFERMVHEQGGKLS GHLPLGKQRDTVAERSGWVESIDCPAIGDAIISMGGGRRKTTDPVEPSVGIDLHFRVGDRVETGQPLWTVYEGQVACPPI QPVRMSETSVPARPLILQRKSGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 5e-63 | 44 |
