Gene Information

Name : RB7232 (RB7232)
Accession : NP_867710.1
Strain : Rhodopirellula baltica SH 1
Genome accession: NC_005027
Putative virulence/resistance : Resistance
Product : glutamine ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3839521 - 3840168 bp
Length : 648 bp
Strand : -
Note : best DB hits: BLAST: pir:G69192; ABC transporter (glutamine transport ATP-binding; E=5e-39 pir:A82184; ABC transporter ATP-binding protein VC1568 [imported] -; E=5e-38 pir:H72342; ABC transporter ATP-binding protein - Thermotoga; E=6e-38 COG: MTH696; COG1

DNA sequence : 
TTGCGAGGTGTGTGCAAGCACTACGCGGACGGTGATGTCGACGCACTGGTGAATGTCAATTTGTCGATCGCGTCCGCCGA
GTTTGTGGCGATCGTCGGACCCAGCGGAGGTGGGAAGTCAACTTTGCTGAACATGTTGGGGGCCCTGGATGAGCCAACTC
GAGGCGAAGTTTGGTTCGAAGGCAAACCGTTGTCGCAGCAACCCAGCCTGGATCGGTTTCGAGCCCACAAAATCGGTTTC
ATCTTTCAGTCGTATCACTTGTTGCCCAATCTGACCGCGCAAGAGAACGTTCAGCTGACAATGTTCGACACGCATCCCAA
CGTGTCGCAACGAAAAGCCGAAGCGATTCGTTTGTTAGAAAGAGTCGGGCTGGGGGATCGAGTGAACCACCGTGCCGACA
AACTTTCGATTGGGCAACGACAACGCGTTGCCATCGCGAGAGCAATTGCGGGGAACCCGCCACTTATCTTGGCCGATGAA
CCCACCGGTGCGCTCGACACGGAACGTGGGAACGAAGTGATGGATCTGCTCGATGAAATCCGCATAGAAGAGAGTTCCAC
ACTTGTCGTGGTGACTCATGATGAACGCGTGGCGGAGCGTGCTGACCGGGTAGTCTATATATGTGACGGAATGTTGCGGA
CCGTCTAA

Protein sequence : 
MRGVCKHYADGDVDALVNVNLSIASAEFVAIVGPSGGGKSTLLNMLGALDEPTRGEVWFEGKPLSQQPSLDRFRAHKIGF
IFQSYHLLPNLTAQENVQLTMFDTHPNVSQRKAEAIRLLERVGLGDRVNHRADKLSIGQRQRVAIARAIAGNPPLILADE
PTGALDTERGNEVMDLLDEIRIEESSTLVVVTHDERVAERADRVVYICDGMLRTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 3e-24 41
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-21 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-22 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-22 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RB7232 NP_867710.1 glutamine ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-30 46
RB7232 NP_867710.1 glutamine ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-33 44
RB7232 NP_867710.1 glutamine ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-28 43
RB7232 NP_867710.1 glutamine ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-33 43