Gene Information

Name : RB6982 (RB6982)
Accession : NP_867563.1
Strain : Rhodopirellula baltica SH 1
Genome accession: NC_005027
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3715019 - 3715879 bp
Length : 861 bp
Strand : +
Note : PMID: 10952301 best DB hits: BLAST: swissprot:Q9WYI7; Y352_THEMA HYPOTHETICAL ABC TRANSPORTER; E=4e-61 pir:A82184; ABC transporter ATP-binding protein VC1568 [imported] -; E=4e-59 ddbj:BAB07392.1; (AP001519) ABC transporter (ATP-binding protein); E=2e-57

DNA sequence :
ATGAGTGTTCCCAACGCCTATGACCCTCAAACGTCGGACGCATCTTTGAGCGGAACCGCTGTGGCAAACACCGAATCGAA
GGCTGGCGTGAAAGGAAAACGCCTGGCCACGAGCATCAAGAATCTGACGAAGGAATACGTTCTCAAGAGCGAGACCGTAC
GAGCTCTTCGTGGAGTCTCATTCGATGTGCCCGAGGGTGACTTTGTCGCGATCATGGGACCATCGGGTAGCGGCAAGAGT
ACGTTGCTGAACCTGCTGGGATGTTTGGACCAACCCACCGCGGGTCACTTGATGTTGGGCGATGATGACATCGGCACCAT
GTCCGATGATGAACTCGCCGACATCCGCAGTCGTCGGATTGGTTTTGTCTTTCAGTCGTACAACTTGATTCAACAACTCA
GTGTTGTTGAGAACATTCAAGTGCCGTTGTACTACCAGGGCAAACTCGGGCCCGAGCAACACAAACGAGTTGTCGAACTG
GCCGACCGAGTCGGCCTAGGCGACCGACTTGATCACCGTCCCAACCAACTCTCGGGTGGACAGCAGCAACGTGTCGCGAT
CGCTCGATCATTGGTCAATGACCCATTCTTCATTCTTGCCGACGAACCAACCGGGAACTTGGATTCGGTCACGACCGAAG
AAATCTTGACGCTGTTCGATGTCCTCAACAGTGAAGGCCGGACGATCATCCTGGTGACACACGAAGACGATGTCGCAGAC
CGAGCCAAGCGAGTCGTTCGTCTTAAAGACGGCATGCTGCACAGCGATGATTTGGTCCCCGAGGCACAACGCGAAAAAGC
TCGCAACGCGCAGCGAGAGGCCGCCAAAGCTATCCTTGCAAAACAGGGCCTCGAATCATGA

Protein sequence :
MSVPNAYDPQTSDASLSGTAVANTESKAGVKGKRLATSIKNLTKEYVLKSETVRALRGVSFDVPEGDFVAIMGPSGSGKS
TLLNLLGCLDQPTAGHLMLGDDDIGTMSDDELADIRSRRIGFVFQSYNLIQQLSVVENIQVPLYYQGKLGPEQHKRVVEL
ADRVGLGDRLDHRPNQLSGGQQQRVAIARSLVNDPFFILADEPTGNLDSVTTEEILTLFDVLNSEGRTIILVTHEDDVAD
RAKRVVRLKDGMLHSDDLVPEAQREKARNAQREAAKAILAKQGLES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RB6982 NP_867563.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-44 50
RB6982 NP_867563.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-41 48
RB6982 NP_867563.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-47 47
RB6982 NP_867563.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-41 46