Gene Information

Name : RB4309 (RB4309)
Accession : NP_866025.1
Strain : Rhodopirellula baltica SH 1
Genome accession: NC_005027
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2221424 - 2222125 bp
Length : 702 bp
Strand : -
Note : PMID: 3288195 PMID: 3762695 best DB hits: BLAST: embl:CAA11724.1; (AJ223978) ABC transporter, YvrO; E=7e-48 gb:AAB89781.1; (AE001001) ABC transporter ATP-binding protein; E=4e-47 embl:CAC21614.1; (AL512667) ABC transporter ATP-binding; E=6e-47 COG: AF1469

DNA sequence : 
ATGGCATTGGTCGAACTACGGGGCGTTTGCAAAAGTTTCCGCAAAGGCGATGAAACGATCACTCCCCTTGACGAGATTGA
TCTCGACATTGAGGCGGGCGACTTCGTCTCGTTGATGGGGCCAAGTGGCACCGGGAAAAGCACGTTGTTGAATCTGGTCA
GCGGGATCGATCGTCCTGATTCGGGAACGATCCACGTGGCCGGAACCGAAGTGACGAAGCTCTCTCGCAGCAAATTGGCT
GATTGGCGCGCCGCGAATTTGGGTTACATCTTTCAAACCCACAATTTGATTCCGGTGCTGACGGCTTATGAGAACGTTGA
ATTGCCAACTTTGCTGCTGAAGATGACTGGTTCGCAACGGCGACAGCGTGTCGAGTTGGCACTCGAAGCGGTGGGGCTGA
GCGATCGAGCTGATCATTACCCGCGGCAATTGTCAGGTGGGCAAGAACAACGCGTTGGGATCGCTCGAGCGATCGTCGCG
CACCCGAAAGTCGTCGTGGCTGATGAGCCAACCGGCAGTTTGGACACGGAAACGAGCGAACAGGTCCAGATCTTGCTGCA
ACGATTGAACAAAGAACTCGACATCACGCTGTTGATGGTCACCCACGACACGGACGCGGCGAGAATCGCATCGAGGCAGT
TGGTGTTGGATCGCGGCAAATTTCGTGAGGTTGAACCGGATGCTTCTTCGGCCGTTCGTTGA

Protein sequence : 
MALVELRGVCKSFRKGDETITPLDEIDLDIEAGDFVSLMGPSGTGKSTLLNLVSGIDRPDSGTIHVAGTEVTKLSRSKLA
DWRAANLGYIFQTHNLIPVLTAYENVELPTLLLKMTGSQRRQRVELALEAVGLSDRADHYPRQLSGGQEQRVGIARAIVA
HPKVVVADEPTGSLDTETSEQVQILLQRLNKELDITLLMVTHDTDAARIASRQLVLDRGKFREVEPDASSAVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-38 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-38 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-38 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-37 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-32 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RB4309 NP_866025.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-42 47
RB4309 NP_866025.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-44 45