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Name : RB3157 (RB3157) Accession : NP_865348.1 Strain : Rhodopirellula baltica SH 1 Genome accession: NC_005027 Putative virulence/resistance : Unknown Product : integrase/recombinase Y4QK Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1627662 - 1629014 bp Length : 1353 bp Strand : + Note : PMID: 7607529 PMID: 9163424 PMID: 8402918 best DB hits: BLAST: gb:AAA88676.1; (M33633) unknown protein [Transposon Tn21]; E=1e-56 embl:CAA75043.1; (Y14748) int [Corynebacterium glutamicum]; E=4e-56 gb:AAF72980.1; AF255921_1 (AF255921) recombinase [Shigell DNA sequence : ATGGGAACGTTTTCGAAACCGGCGAGTGCCGAACAGAAGCAGCGTTGGGCGAAGATATGGTTCCAAAAGCTTTGCCAATT TCACCGGCGGAAGACGGAACCGGATTGGAAGTTTTCGGCCGATGATGTGATTGCTTTCTTGCGGTCACGTCGCGATGCGG AGGTGCCGGCTTGGAAGCGGATGAAGATCATCGAAGGCTTGATTCAGTACCGTGAGACGATCCAGCGTCGAGAGGTGAAC GACCTGTTGCCGCTGAAGAAAAAGATGGGCGAGATCATCTTGATCGAGCAAGCCAAGACAGGCGGGTTGGATTCGATCGA CGATGTGGTCGGCAAGATCAATCCCAACGAGATGGATGCGATTCAGGAGTTCCGTCGATCGATGCGTCGAGCTGGTTTGG CGATCGCGACCGAGCGTTGTTACGTGAGGAAGCTGAAGGCGTTCATGGCGGATCGTGGGCTGAATTGTCTGGCGGATTTC GACCGGATTCACGCTTGTGACGTGGAGGCTCACCTGACGGATTTGGCGGTCGATGGCAACGTTTCTCCGTCGACTCAGAA CCAAGCATTTCATTCGTTGCTGAAGTTTTTCGAGTTGGTGCTGAAGCGTGAGATGGGGAAGATCGAAGCGATCCGTGCGA ACAAGGATTCGATGGCCCCCACGGTGATGTCACCAGAGGAGGTCGGCCAAGTGTTCGAGGGACTCGAGGGCGTGTATCTG GTGATCGCGAAGTTGCTGTATGGTTGCGGGATGAGGATCAGTGAGACGCATCGGTTGCGGGTCAAGGACATTGATTTCGC AAACAAGCAAATCGAGATTCGTCAGTCCAAGGGCAACAAGAGCCGATTGGTTCCGATGCCAGATGATTTGATTGAACCGC TGCGGCGTTTTGTCAAGACTCGCGACGCACTGCACGAACATGATTTGGCCAACGGCACGGCCTCGGTGTATCTGCCGTAT GCGTTGGACCGGAAGTATCCGTCGGCGCATCGTGAACTGAAGTGGCAGTATCTGTTTGCGTCGCACCGATTGTCACGGGA TCCGAGAACCGGCCGCATCCACCGTCATCACTTGCGCGCAACCACCTTCCCGACTCACTTGCGACGCGCGGTGGAACAGG CGGGGATTCTGAAGCATGTGACGAGCCACACGTTTCGCCATTGTTTTGCGACGCATCTGTTGTGGCAGGGGACGGACATT CGCCAGATTCAGCAGTTGCTGGGGCACAGTGACGTGAAGACGACGGAGATCTACACGCATGTGCGGAATCCACATGAGGC GAAGGTGGTCAGTCCGTTGGATCGGTTGGTGCGGGAAGAGGTGGCGGGTATTGGTTGCGCTCGGGCCGACTGA Protein sequence : MGTFSKPASAEQKQRWAKIWFQKLCQFHRRKTEPDWKFSADDVIAFLRSRRDAEVPAWKRMKIIEGLIQYRETIQRREVN DLLPLKKKMGEIILIEQAKTGGLDSIDDVVGKINPNEMDAIQEFRRSMRRAGLAIATERCYVRKLKAFMADRGLNCLADF DRIHACDVEAHLTDLAVDGNVSPSTQNQAFHSLLKFFELVLKREMGKIEAIRANKDSMAPTVMSPEEVGQVFEGLEGVYL VIAKLLYGCGMRISETHRLRVKDIDFANKQIEIRQSKGNKSRLVPMPDDLIEPLRRFVKTRDALHEHDLANGTASVYLPY ALDRKYPSAHRELKWQYLFASHRLSRDPRTGRIHRHHLRATTFPTHLRRAVEQAGILKHVTSHTFRHCFATHLLWQGTDI RQIQQLLGHSDVKTTEIYTHVRNPHEAKVVSPLDRLVREEVAGIGCARAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| intI1 | CAB46685.1 | DNA integrase | Not tested | Not named | Protein | 1e-49 | 43 |
| intI1 | AGK07098.1 | IntI1 integrase | Not tested | SGI1 | Protein | 3e-49 | 43 |
| intI1 | AGK06930.1 | IntI1 integrase | Not tested | SGI1 | Protein | 3e-49 | 43 |
| intI | YP_001844881.1 | integrase | Not tested | AbaR20 | Protein | 5e-49 | 43 |
| intI1 | AAK02045.1 | integrase | Not tested | SGI1 | Protein | 1e-49 | 43 |
| intI1 | AGK06967.1 | IntI1 integrase | Not tested | SGI1 | Protein | 3e-49 | 43 |
| intI1 | YP_005797130.1 | integrase | Not tested | AbaR4e | Protein | 5e-49 | 43 |
| intI1 | ABZ01842.1 | IntI1 | Not tested | SGI2 | Protein | 1e-49 | 43 |
| intI1 | AGK07013.1 | IntI1 integrase | Not tested | SGI1 | Protein | 3e-49 | 43 |
| intI1 | YP_005797145.1 | integrase | Not tested | AbaR4e | Protein | 5e-49 | 43 |
| intI | CAJ77028.1 | Integrase | Not tested | AbaR1 | Protein | 1e-49 | 43 |
| intI1 | AGK07071.1 | IntI1 integrase | Not tested | SGI1 | Protein | 3e-49 | 43 |
| intI1 | ACN81019.1 | IntI1 integrase | Not tested | AbaR5 | Protein | 5e-49 | 43 |
| intI1 | ACY75520.1 | integrase | Not tested | Tn6060 | Protein | 1e-49 | 43 |
| intI1 | AFV53119.1 | IntI1 integrase | Not tested | AbGRI2-1 | Protein | 3e-49 | 43 |
| EC042_4092 | YP_006098375.1 | integrase | Not tested | Tn2411 | Protein | 4e-49 | 43 |
| intI1 | ACY75535.1 | integrase | Not tested | Tn6060 | Protein | 1e-49 | 43 |
| intI1 | AGK36642.1 | IntI1 integrase | Not tested | AbaR26 | Protein | 3e-49 | 43 |
| intI1 | ABB48427.1 | IntI1 integrase | Not tested | SGI1 | Protein | 3e-49 | 43 |
| intI1 | AGF34986.1 | IntI1 integrase | Not tested | SGI1 | Protein | 1e-49 | 43 |
| unnamed | AAL08437.1 | Tn21 integrase IntI1 | Not tested | SRL | Protein | 3e-49 | 43 |
| intI | CAJ77082.1 | Integrase | Not tested | AbaR1 | Protein | 3e-49 | 43 |
| intI1 | AGF35026.1 | IntI1 integrase | Not tested | SGI1 | Protein | 1e-49 | 43 |
| unnamed | ACF06155.1 | class 1 integrase | Not tested | Tn5036-like | Protein | 3e-49 | 43 |
| intI1 | AGF35060.1 | IntI1 integrase | Not tested | SGI1 | Protein | 3e-49 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RB3157 | NP_865348.1 | integrase/recombinase Y4QK | VFG1028 | Protein | 2e-49 | 43 |
