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Name : fliP (HH0692) Accession : NP_860223.1 Strain : Helicobacter hepaticus ATCC 51449 Genome accession: NC_004917 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliP Function : - COG functional category : N : Cell motility COG ID : COG1338 EC number : - Position : 672436 - 673233 bp Length : 798 bp Strand : + Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus DNA sequence : TTGAAAAAAATATTTTGCCTGCTTAGTTTATGTATGCTTTTTACTTATGCAGAGCCAAAACTTGAGCCCGCACTTCCTGC ACCCTCTAGCATTCCATCTGTGCCATCAATCCCTAATAACCCTATCTTACCATCAGTAGATCTCTCCCTTACTGCACCAA AAGAACCAACCGAACTTGTTGCCACTCTCAATATCGTGCTTATCATCACGCTTCTTGTCATTGCTCCATCGCTTGTGCTT GTGATGACAAGCTTTACACGTATTGTCATTGTTTTTGCTTTTTTGCGCACTGCACTTGGCACACAGCAATCTCCCCCAAC ACAAGTGCTTGTTAGCCTTGCTCTAATTTTGACATTTTTTATTATGGAACCTGTGGCAACCAAAAGCTATGAAGTGGGTA TTAAACCTTATGCAGAAAAAAAAATCTCCTATGATGAAGCCTTTGAAAGAGCGATTGTACCTTTTAAAGATTTTATGATT AAAAACACGCGTGAAAAAGATTTGGCTCTTTTTTTTAGAATCCGCCAACTTGAAAACCCTCAAAGTGTTAATGATGTGCC CTTAACAGTGTTGCTTCCAGCATTTATGATTAGTGAGCTTAAAACTGCATTTTGGATTGGTTTTTTGCTTTATCTGCCTT TTTTAGTTATTGATATGGTTATTAGCTCGGTGCTTATGGCAATGGGTATGATGATGTTGCCACCTGTAATGATTTCGTTG CCTTTTAAGATTCTTGTTTTTATACTTGTTGATGGTTGGAATCTCCTCATAGGTAACCTTGTGCAAGGCTTTAAGTAG Protein sequence : MKKIFCLLSLCMLFTYAEPKLEPALPAPSSIPSVPSIPNNPILPSVDLSLTAPKEPTELVATLNIVLIITLLVIAPSLVL VMTSFTRIVIVFAFLRTALGTQQSPPTQVLVSLALILTFFIMEPVATKSYEVGIKPYAEKKISYDEAFERAIVPFKDFMI KNTREKDLALFFRIRQLENPQSVNDVPLTVLLPAFMISELKTAFWIGFLLYLPFLVIDMVISSVLMAMGMMMLPPVMISL PFKILVFILVDGWNLLIGNLVQGFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ssaR | NP_460384.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 3e-27 | 43 |
| ssaR | CAA68199.1 | secretion system apparatus, SsaR | Virulence | SPI-2 | Protein | 2e-27 | 43 |
| ssaR | YP_216427.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 3e-27 | 43 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 3e-27 | 43 |
| yscR | NP_456109.1 | putative type III secretion protein | Virulence | SPI-2 | Protein | 1e-26 | 42 |
| yscR | NP_805090.1 | type III secretion system protein | Virulence | SPI-2 | Protein | 1e-26 | 42 |
| lscR | AAO18040.1 | LscR | Virulence | TTSS locus | Protein | 2e-25 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliP | NP_860223.1 | flagellar biosynthesis protein FliP | VFG1259 | Protein | 1e-43 | 57 |
| fliP | NP_860223.1 | flagellar biosynthesis protein FliP | VFG2494 | Protein | 5e-48 | 56 |
| fliP | NP_860223.1 | flagellar biosynthesis protein FliP | VFG2338 | Protein | 2e-44 | 55 |
| fliP | NP_860223.1 | flagellar biosynthesis protein FliP | VFG2016 | Protein | 1e-42 | 52 |
| fliP | NP_860223.1 | flagellar biosynthesis protein FliP | VFG0519 | Protein | 1e-27 | 43 |
| fliP | NP_860223.1 | flagellar biosynthesis protein FliP | VFG0394 | Protein | 3e-26 | 43 |
| fliP | NP_860223.1 | flagellar biosynthesis protein FliP | VFG0044 | Protein | 2e-27 | 41 |
