|
Name : katA (HH0043) Accession : NP_859574.1 Strain : Helicobacter hepaticus ATCC 51449 Genome accession: NC_004917 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : 1.11.1.6 Position : 46498 - 47934 bp Length : 1437 bp Strand : - Note : - DNA sequence : ATGTCAAAGAAATTTACGACAGCAACAGGCACACCATTAGGTGATAATCAAAACTCAATTACAGCAGGCAAAAAGGGACC TACACTTTTACAAGATACTTGGCTTTTAGAAAAACTTGCACATTTTGATAGAGAGAGAATCCCAGAGAGAGTGGTGCACG CTAAAGGAAGTGCAGCATATGGTGAATTAACAATTACAAATGATATTACTCAATACACAAAAGCAGAACTTTTTAACAAA GTGGGCAAAAAAACAAAAGCATTTTTGCGTTTTTCTGTGGTGGCAGGTGAGCGAGGAGCAGCAGATGCAGAGCGTGATGT GCGTGGTTTTGCACTCAAGCTTTATACAAATGAAGGAAATTGGGATATTGTAGGTAATAACACACCTGTGTTTTTTATTA AAGATGCGATTAAATTCCCTGATTTTATTCATACACAAAAACGAGACCCCAAAACAAATATGAAAAGCCCTACGGCAATG TGGGATTTTTGGAGTTTGCACCCAGAATCCTTACATCAAGTAACGATTTTAATGAGCGATAGGGGTATTCCACGAAGTTA CCGAGAAATGCACGGATTTGGTAGCCACACATATAGCTTTATCAATGCCAAAAACGAGCGCTTTTGGGTGAAATTCCATT TTGTTTGTTTGCAAGGTATTCATAACCTTACTAATAAAGAATCAGAGGCAGTTATCGCCAAAGATAGAGAATCTCATCAA AAAGATTTGTTTGAAAATATTGAAAAGGGTAATTTCCCTAAATGGCGATTCTGTATCCAAGTAATGAGCGAAAAAGAGGC GGAAAACTATCGTTTTAATCCTTTTGATTTAACAAAAGTATGGAGTCATAAAGATTATCCGCTTATTGAAGTGGGGATTT TAGAACTCAATAAGAATCCAGAGAATTATTTTGCAGAAGTAGAACAAGCAGCTTTTAATCCTGCAAATATCGTGCCCGGA GTAGGATATAGCCCCGATAAAGTATTGCAAGGGCGGCTTTTTAGTTATGGAGATACACAAAGATACCGCTTAGGCATTAA TCACACTCAACTTCCTGTAAATGCACCTATTGTGCCTGTGAATAATACGCATCGTGATGGTTTTATGCAGCAAGGTCAGT TTGGCGATAGACGCAATTATGAGCCAAGTTATTTTAATGATTATGTTGAAGATAAAAACGCACTTGAACCACCACTTTTT GTGCAAGAGGGTGATGTAATGTATAAATATGACCATCGCGAATATGAAGATGATTATTTTGTGCAAGCAGGAGATTTGTA TCGCTTGATGACTGCAGAGCAAAAAGAAGCATTATGTCAAAATATTAAAGAATCAATGGAAGGTGTGCCAGATGAAATTA AAAAACGTCAGCTTGAGCACTTTAAAAAAGCAGATAAAGCGTATGGCAAGAGAGTGGCAGAGCTTTTGGGGTTATAA Protein sequence : MSKKFTTATGTPLGDNQNSITAGKKGPTLLQDTWLLEKLAHFDRERIPERVVHAKGSAAYGELTITNDITQYTKAELFNK VGKKTKAFLRFSVVAGERGAADAERDVRGFALKLYTNEGNWDIVGNNTPVFFIKDAIKFPDFIHTQKRDPKTNMKSPTAM WDFWSLHPESLHQVTILMSDRGIPRSYREMHGFGSHTYSFINAKNERFWVKFHFVCLQGIHNLTNKESEAVIAKDRESHQ KDLFENIEKGNFPKWRFCIQVMSEKEAENYRFNPFDLTKVWSHKDYPLIEVGILELNKNPENYFAEVEQAAFNPANIVPG VGYSPDKVLQGRLFSYGDTQRYRLGINHTQLPVNAPIVPVNNTHRDGFMQQGQFGDRRNYEPSYFNDYVEDKNALEPPLF VQEGDVMYKYDHREYEDDYFVQAGDLYRLMTAEQKEALCQNIKESMEGVPDEIKKRQLEHFKKADKAYGKRVAELLGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 4e-142 | 62 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 5e-102 | 48 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 2e-99 | 47 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 2e-99 | 47 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 2e-99 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 2e-99 | 47 |
