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Name : fliQ (HH0438) Accession : NP_859969.1 Strain : Helicobacter hepaticus ATCC 51449 Genome accession: NC_004917 Putative virulence/resistance : Virulence Product : flagellar biosynthesis protein FliQ Function : - COG functional category : N : Cell motility COG ID : COG1987 EC number : - Position : 419734 - 420000 bp Length : 267 bp Strand : + Note : with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus DNA sequence : ATGGAAGCTCAACTTATGGCACTTGCGATTCAAACTTATAAACTCACGCTCATTCTTTCGCTTCCTATGCTTTTAGCTGG GCTTATTGTGGGTTTGCTTATTAGTATTTTTCAGGCTACCACGCAGATTAATGAAATGACACTCACTTTTGTGCCAAAGA TTCTCGCAGTTGTTGCTGTAATTATATTTACTATGCCGTGGATGATAAATATGATTACAGATTATACGCGTATGCTTTTT ACAATGATTTCTAATATTAATTTTTAG Protein sequence : MEAQLMALAIQTYKLTLILSLPMLLAGLIVGLLISIFQATTQINEMTLTFVPKILAVVAVIIFTMPWMINMITDYTRMLF TMISNINF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| escS | AAL57528.1 | EscS | Virulence | LEE | Protein | 6e-09 | 41 |
| escS | CAC81848.1 | EscS protein | Virulence | LEE II | Protein | 6e-09 | 41 |
| escS | YP_003223489.1 | T3SS structure protein EscS | Virulence | LEE | Protein | 9e-09 | 41 |
| escS | YP_003232139.1 | T3SS structure protein EscS | Virulence | LEE | Protein | 9e-09 | 41 |
| escS | AAK26701.1 | EscS | Virulence | LEE | Protein | 6e-09 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliQ | NP_859969.1 | flagellar biosynthesis protein FliQ | VFG2339 | Protein | 4e-12 | 50 |
| fliQ | NP_859969.1 | flagellar biosynthesis protein FliQ | VFG2015 | Protein | 1e-09 | 50 |
| fliQ | NP_859969.1 | flagellar biosynthesis protein FliQ | VFG0187 | Protein | 0.012 | 41 |
