|
Name : rplI (HH0311) Accession : NP_859842.1 Strain : Helicobacter hepaticus ATCC 51449 Genome accession: NC_004917 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L9 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0359 EC number : - Position : 306679 - 307122 bp Length : 444 bp Strand : - Note : in Escherichia coli this protein is wrapped around the base of the L1 stalk DNA sequence : ATGAAAGTTCTACTTTTGGAAAATGTGCAAGGGCTTGGTAAAAAGGGCGAGATTGTTGAAGTAAAAGATGGTTATGGGCA AAATTTTCTTATCGCTAAGGGCAAGGCTCAACGCGCTACAAATGAGGTAATCAATAAATATAAAGCCCAGCAACGCAAAG CAGAGGAGCTTGCTGCGCTTGAAAAGGCTGAAATGCAGCAAATGAAAAAAACAATAGAATCTCTCACGCTCACACTGCAT AAAAAGGTAGGTGCGAATGATACGCTTTTTGGTTCTATCACAAAAGAAGAGATTGCTCTTGCTTTAGAGGAGCATAAAGT AAGCCTTGATAAGAAGCATATTGAGATTGCTCAAGCGATTAAACATACAGGTAATTTTGAAGTGCAAGTCAAGCTTGGGC AGGGCATTAACGCTACACTTAAACTTGAGATTAAAGCACAATAA Protein sequence : MKVLLLENVQGLGKKGEIVEVKDGYGQNFLIAKGKAQRATNEVINKYKAQQRKAEELAALEKAEMQQMKKTIESLTLTLH KKVGANDTLFGSITKEEIALALEEHKVSLDKKHIEIAQAIKHTGNFEVQVKLGQGINATLKLEIKAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rplI | YP_003728751.1 | 50S ribosomal protein L9 | Not tested | cag PAI | Protein | 2e-30 | 59 |
