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Name : tktA (HH0026) Accession : NP_859557.1 Strain : Helicobacter hepaticus ATCC 51449 Genome accession: NC_004917 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 28808 - 30766 bp Length : 1959 bp Strand : - Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGCAAAAAACCTCACCACATATTACAGATGAAGATATACCTTTATTACAAAAAATGTCGCACACATTAGGGTTTTTGTG TGCAGATATGGTGCAAAAAGCAAATAGCGGACATCCCGGCGCACCTATGGGACTTTCAGATATTGCAAGTGTGTTACATT TTCATATTAATCTTGCTCCAACACAACCTCAATGGTTAAATCGAGATAGAATTATTTTTAGTGGAGGACACGCAAGCGCA CTCGTATATTCGCTCCTTCATTTATGGGGTTTTGAGGTGAGTATGGCAGATTTGCACTCTTTTAGGCAATTAGATTCTAA AACACCCGGACACCCTGAATATAGACATACTCAAGGTATTGAGATAACAACAGGTCCCCTTGGGCAAGGTATAGCAAATG CAGTGGGTATGGCTATGGCAAGTAAATATGCACAGAATTTGTTTGGGCGGGAAATCATTTCGCATAATATATATTGTTTA TGTGGCGATGGGGATTTACAGGAGGGTATCAGCTATGAAGCAGCTTCTTTAGCTGGACATCACGCTCTTTCAAATTTGAT TCTTATTTATGATAGTAATCATATCACAATAGAAGGCGATACGCAACTTGCGATGAGTGAGGATATTGCTAAACGTTTTG AAGCACAGGGTTGGGAAGTTTTAAGCTGCGATGGACACGACTATATACAAATTCACAATGTGCTTACCAATGCTAAAACT TCTTCAAAACCCATACTTATTATTGCTCATACCATTATCGCTAAGAATGCCCTTAGTCTTGAGGGTAGTCATAAAGCACA CGGCGCACCTTTGGGTGAAGAAATTATCGCCACAGCAAAGCAAAAACTTTCTTTTCCTGCAGAATCTTTTTATATACCTG ATGATGTAGCACTTGCTTTTGGCACGATGAAGGAGCGTGGTGAGTTGAACTTTGCACAATGGTATAAAAATTATGAGAAT CTCCCTCAAATTGCAAAAGAACGGCTTGATAAAATGAGAGAGCCCGATGTTTCCCATATTGTTTATCCACAATTTGCACT TGGCGAAAGTATGGCTACACGTGTGAGTAATGGCAAGATTCTTAATAGTATTTCTCAAGCGTTAGAAGGATTTATTGGGG GAAGTGCAGATTTAGCACCATCAAATAATACACAGCTACAAGATGAGGGTGATTTTCCGCAGGGTAAAAATTGGCATTTT GGTATCCGAGAACACGCAATGGGTGCAATTTGTAATGGTGTGGCAAATTATGGCTTATTTTTACCTTTTTGCGCAACATT TTTTGTTTTCAGTGATTATATGAGCCCAAGTGTGCGTGTAGCAAGCCTTATGAAAGCGAAAGTATATTATATTTGGACGC ACGATAGTATAGGTGTGGGTGAAGATGGTGCGACACATCAGCCCATTGAACAATTAAGCCATTTTAGAGCAATGCCAAAT CTCCTTGTTTTTCGTCCCGCTGATGCAAATGAGAATATTGCTTGTTGGCAGGTTGGCTTAGATTCCAAGCTACCTTGCGC TTTTGTGCTTAGTCGTCAGAATCTCCCCGTTATTATGGAATCCACTCCTCAATTAAAAAAGCAAGTGCAAAAAGGCGGTT ATGTATTGCGTTCGTGCGACAATGCAGTTATTACCCTTATGGCAAGCGGAAGTGAGGTAAGTCTTGCACTCAAAGCGTGT GAAACACTAGAAGATTTAGGTATCAAAACACAAGTAGTAAGTGTACCTTGCCTTGATTTGCTTTTGGAACAACCTAAGGG TTACATCAAAGAATTATGCGGAAAAAGTGCAGTGCTTGCTATTGAGGCTTCAAGAGGCTTAGAATGGTATGCAGTGGCTG ATGAAGTGATTGGTATGCAGAGTTTTGGTGCTTCAGGGAAAGGCGAAGCCCTCTTTAATCGTTTTAATTTTAATATAGAT TATATCATAGCTGCTGCACAAAAGCTTATTCAAAATTAA Protein sequence : MQKTSPHITDEDIPLLQKMSHTLGFLCADMVQKANSGHPGAPMGLSDIASVLHFHINLAPTQPQWLNRDRIIFSGGHASA LVYSLLHLWGFEVSMADLHSFRQLDSKTPGHPEYRHTQGIEITTGPLGQGIANAVGMAMASKYAQNLFGREIISHNIYCL CGDGDLQEGISYEAASLAGHHALSNLILIYDSNHITIEGDTQLAMSEDIAKRFEAQGWEVLSCDGHDYIQIHNVLTNAKT SSKPILIIAHTIIAKNALSLEGSHKAHGAPLGEEIIATAKQKLSFPAESFYIPDDVALAFGTMKERGELNFAQWYKNYEN LPQIAKERLDKMREPDVSHIVYPQFALGESMATRVSNGKILNSISQALEGFIGGSADLAPSNNTQLQDEGDFPQGKNWHF GIREHAMGAICNGVANYGLFLPFCATFFVFSDYMSPSVRVASLMKAKVYYIWTHDSIGVGEDGATHQPIEQLSHFRAMPN LLVFRPADANENIACWQVGLDSKLPCAFVLSRQNLPVIMESTPQLKKQVQKGGYVLRSCDNAVITLMASGSEVSLALKAC ETLEDLGIKTQVVSVPCLDLLLEQPKGYIKELCGKSAVLAIEASRGLEWYAVADEVIGMQSFGASGKGEALFNRFNFNID YIIAAAQKLIQN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 7e-108 | 41 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 5e-99 | 41 |
