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Name : HH0252 (HH0252) Accession : NP_859783.1 Strain : Helicobacter hepaticus ATCC 51449 Genome accession: NC_004917 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG3523 EC number : - Position : 243237 - 246791 bp Length : 3555 bp Strand : + Note : similar to Vibrio cholerae IcmF; VirB10-like protein DNA sequence : ATGTTTGGCAAGATATTTAATTATCTCAAATCAAAAACTTTTCTCTATATTTTACTTATATGTTTTGCGTTGCTTTTAAG TGTACTTTTTTACATATACTCGCCCTTATTTGCATTTAATGATATTTATATTTTTAGTAGCGCATTAACAAGAATCCAAG TGCTTATTGTCGTATGGCTTTTAATCTTTTTTATCTTTCTTTATAGACCACTTATTCATCTTATTCAATCGCTCAAAAAT GAGAAACACATACAGTACAAGGAAATCAAACAAGAAGTTACAAAGGCATTCCGCAGGGCTAAAAGAAATTATTTCATTGC TCTAAATGACGCAAAGAGTATGTGGAAAAGAAAACTCTATCTTAAAAATATCCCTTTAGTGATTATTATTGGTAATGAGG GAGCAGGCAAAAGCTCGTTTATCAATTATGCGAATATACAATATCCATTGAGTGAAAGCTTGACATCTTATAAGAAATTT CACAAATCTACCAACAACTTCAATCTTTACATTTCTCAAAAGGGTGCATTGCTTGATACAGAAGGTAATTATTTTGCACA AGAGAACTTTCGGCAAACAAGTAATACCGATGAAATTGCTGAAGATAATTTAGAAAAGAATAAAGATTTTTTAATCAAAA AGGGCGTATGGAATCAATTCTTACACTTCCTTAATACTAATACCTTTCATAGCAAACTTAATGGCATTGTGCTTATTATT GATGTGCATGCTTTTTTACAGAATCCAAAGCAATATGAACAAAATGTCTTACAATATCTAAGCAAAAGAGTGAGTGATTG CGAAGAAAATCTAGGCTTGCAACTCCCCATTTATATTGTTTTTAATAAAATTGACTTGTTAGAGGGTATGCGGACATATT GGGACATCTTTGATGAAAGCATTGCAAATAAAATGCTAGGACTTACTTTAGATAAAAATAGTAGCAAATTAGAACTACAA AATACTTTTACAGAATTAAGCAATTCATTGCTCTATACTTTTATGCGTAGAAATCAATCCTTACATTCACTTGAAGACAA AAATTTAGCCCTTTTATTTTTAAAGCAACTTGATGTGCTTTTTGCCCTTGCAATAGACTTTATCCTCCAAGCAAAGGAAC AAAATGCCTTTAAAAACAAATCCTATATCCGCGGCGTATATTTTACCTCCGCATACCAAGAAAATGTCCCCAGAAATTAC TTGCTTGATGCTGTGTGTGAAAAATACGAAATCAAAAAACCTCCGGCAAAATCCGCAACCAAGCAAAATAAGCGAAGCTA CTTTGTGCAGGGTTTGTTAGAACATATTTTTCTTAAAGATGCACATCTAAGCAGTATGATTAAAACCTCTTGGCAAACTT TCAAACTCGCCTTTGGAACTATAAGTATATGTATATTTGGATATGTTTTTTGCACTTATTTAATCCATAAAACCTATAAA GAAGTAGATAAAAGCCATATCACATTTAATAGCATTACTTCATTACTTGCCAATACAAGCTCTTATGAACATCTTACCCT GCAAGAAAAAACCGAACTTATGCTTCATCTTAAAGCCATACTCAAAAACTATCCATCTCTATTTGAAAAGCCCTCCATTA TACAGTATTTTTCACTGAATTTCTCCTATCAAGGATTTTTGCCTGCAAGAGACTTTTATTATGCTATCAATGAAGAAGTG ATTGGCAAAACATTGCTTAGAGAAATGGAGCAGATTCTCTTACACAATACCGATCAAACCACACTTATTGAAACCATCTA TATGTATCAATCACTCTATGATGAAGCATATATAAATAAACCTCTTTTGGCAAATTGGGTTATAAAGAATTGGCAACCTT TTGCTAAATATAAAATTCCAAAAGATGATTTTATTACCGCTATTGAAGATTTAGCTATAGGCAATCTCTCACATACACAA CCAAAAGATACACAAGCGCTACACATAGCAAAAACTCAAATTATGCAATTAGAGCAACAACAGAGAATCTATACCATTAT GGCTTTTAGAAATAGCCTAAAAAAACAAAGCTTTTTTAACCTTAAAGATAAGGTAGGCACAGCATTTTATATGATATTTG AGCATACTGATAAATTAAGTCAAATTGACAAAACCTATACAAAAGATGGTCTAATGGAGTTTTTAAGTAATTTAGATACC AATATACAAACTGCTATCAAAATAGAATCTTGGGCGTATAATGAAAAAATGCAATACCAAGCCCTCACAGAACAAGCACA AAGAGATTTATACACACATATTATTAGTATTTACCTTAATGATTATAAACAAAGATGGGAAGAATTACTTCAGGCTATAT CTCCTAAGCAATATACCGACAAAAACAATATACTCACACAATTACAAATCTTATCAGAATCTACCAATCCACTCAATAGT CTCATTAAAATCGTAAATGATAATACCCACCTAAACGACACTCTTTTGCTTAATTACGCATACGGCTTAGGATTGCCAAG CTCAGATATTAAAGCACAATTTACATATATTAGTAACTCCTTTAAAGATTATTATGACTTCATAGGAGAAAAATCCTTAC TTCTCTCTCAAATAGATTCCTTTAATGACATAAAAAAGCAAAGTAGCACGGAAGAAATAAAAGAGATACTCGCTAAAGAT ATACAAAATATGAGTGGTAAAATTACAGAATTTACAAAAGATGATACAAAAAACATAAAAGATAAGCTTATATATATCCT TGAAGGAAGTAATGATGAAACTGACGCATTTGTAGAGCTAAAGCGAAACACAGCAATGTTGCCTCATGCGTTAAAACAAT ACTACAATGAGATTTCTACACTCTCTTGGAACGTTATAGAAAAAAGCACCTATGCACTTCTAAATAATGCATGGAAAAAA GAGGTGTATGATACTTTTATAAATGATATCTCCCCTTTTTATCCTTTCAATGCTTACTCGGATAAATCCTTGCCACTCAA CACTTTTAAAGATTTTTTTGGCAATACAGGCACATTACAATCTTTTTATACGCAATATCTAAGTAAAATTTTGCAAAAAA AAGGCAATACCTATGTGCCAAATCCTGCCTATAGCGAGACGATAAAGCTTTCTGCTCAATTTATAAGTTTTTTTAACCAA ATAAGCAATCTCAATAGCATATTTGATAATAACAATAACCTTACACTTAACTTTTTTATACAATGCCTTGGTTTATCATC AGATTTTAGCTCTCTTGATATAAGCTATAACAACCAGACTTTACACTATGATCACACGCTTAATCCTAAAATCCAGATTA TTATTGAACAATTCAATAGTAGCACGGAGTTACGTTTGAGCGTGAATGACTATTACCAAATGCCTCAATACAATAAAATT TATAGTGGCGAATGGGCGTGGCTTAGATTCATAAAAGACATTACACCTGCTCAAAATACAGGCAACACTCTTTACTTTGA AAATAATAAACAATGGTATTTTGATTTTAGCATTACTCCAAATAGGCTAGAACTTTTACATTTAAGCCGTATTCTAACGC ATTTTAATATGCCTCAACTTATCACTCAACAATAA Protein sequence : MFGKIFNYLKSKTFLYILLICFALLLSVLFYIYSPLFAFNDIYIFSSALTRIQVLIVVWLLIFFIFLYRPLIHLIQSLKN EKHIQYKEIKQEVTKAFRRAKRNYFIALNDAKSMWKRKLYLKNIPLVIIIGNEGAGKSSFINYANIQYPLSESLTSYKKF HKSTNNFNLYISQKGALLDTEGNYFAQENFRQTSNTDEIAEDNLEKNKDFLIKKGVWNQFLHFLNTNTFHSKLNGIVLII DVHAFLQNPKQYEQNVLQYLSKRVSDCEENLGLQLPIYIVFNKIDLLEGMRTYWDIFDESIANKMLGLTLDKNSSKLELQ NTFTELSNSLLYTFMRRNQSLHSLEDKNLALLFLKQLDVLFALAIDFILQAKEQNAFKNKSYIRGVYFTSAYQENVPRNY LLDAVCEKYEIKKPPAKSATKQNKRSYFVQGLLEHIFLKDAHLSSMIKTSWQTFKLAFGTISICIFGYVFCTYLIHKTYK EVDKSHITFNSITSLLANTSSYEHLTLQEKTELMLHLKAILKNYPSLFEKPSIIQYFSLNFSYQGFLPARDFYYAINEEV IGKTLLREMEQILLHNTDQTTLIETIYMYQSLYDEAYINKPLLANWVIKNWQPFAKYKIPKDDFITAIEDLAIGNLSHTQ PKDTQALHIAKTQIMQLEQQQRIYTIMAFRNSLKKQSFFNLKDKVGTAFYMIFEHTDKLSQIDKTYTKDGLMEFLSNLDT NIQTAIKIESWAYNEKMQYQALTEQAQRDLYTHIISIYLNDYKQRWEELLQAISPKQYTDKNNILTQLQILSESTNPLNS LIKIVNDNTHLNDTLLLNYAYGLGLPSSDIKAQFTYISNSFKDYYDFIGEKSLLLSQIDSFNDIKKQSSTEEIKEILAKD IQNMSGKITEFTKDDTKNIKDKLIYILEGSNDETDAFVELKRNTAMLPHALKQYYNEISTLSWNVIEKSTYALLNNAWKK EVYDTFINDISPFYPFNAYSDKSLPLNTFKDFFGNTGTLQSFYTQYLSKILQKKGNTYVPNPAYSETIKLSAQFISFFNQ ISNLNSIFDNNNNLTLNFFIQCLGLSSDFSSLDISYNNQTLHYDHTLNPKIQIIIEQFNSSTELRLSVNDYYQMPQYNKI YSGEWAWLRFIKDITPAQNTGNTLYFENNKQWYFDFSITPNRLELLHLSRILTHFNMPQLITQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| HH0252 | NP_859783.1 | hypothetical protein | Not tested | HHGI1 | Protein | 0.0 | 100 |
