|
Name : thiC (HH1581) Accession : NP_861112.1 Strain : Helicobacter hepaticus ATCC 51449 Genome accession: NC_004917 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1509707 - 1511080 bp Length : 1374 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAGAACACAATGGGTGCAACAGCGTGCGGACGATAAAATTCGCACACAACTTCACTATGCAAAAAAAGGCATTATCAC AAAAGAAATGGAATATGTAGCTAATATTGAAAATATAAGCGCTGAACTTATACGGCAAGAAATTGAACGTGGCAGACTGA TTATTCCCGCAAATATCAATCATACCAATCTTAAACCTATGGGAATTGGCATAGCTACACGCACTAAAATTAATTCAAAT ATTGGTAGCTCCTCACTTGCAAGCTCCATTGATGAAGAAGTAGAAAAAGTTAAAGTATCTATTAAATATGGTGCGGATAC GATTATGGATTTAAGCACAGGTGGGGATTTAGATGAAATACGCACTGCAGTTATTCAAGCCTCAAGTGTGCCTATTGGAA CGGTGCCTATATATCAGATTCTCTATGATGTAAAAAATGATATATTGCAGCTTGATATTGACACTATGCTTTCGGTGCTC AAAAAACAAGCTAAACAAGGGGTAAGTTATTTCACTATTCATTGCGGATTTTTACTTTCACATATGCCATTTGTTGCTAA ACGAAAAATGGGTATTGTCTCACGTGGTGGTAGCCTTATGGCAAGTTGGATGATGCACTACCACAAAGAAAATCCTTTTT ATGAGTATTTTGATGAGATTCTCAAAATTTGCCAAGAATATGATGTATCTCTCTCGCTTGGAGATTCCTTGCGTCCGGGT TGCTTGGCTGATGCGAGTGATGAGGCACAATTTGCCGAACTCAAAGTATTAGGTGAACTTGCTAAAAGAGCTTGGAAGGC TGATGTGCAAGTAATGATAGAAGGACCCGGACACGTGCCGCTTAACCAAATTGAACGCAATGTTGAGCTTCAAAAACAAT ATTGTAACCACGCACCTTTTTATGTGCTAGGACCTTTGGTTACAGACATTGCGGCAGGATATGACCATATCGCAAGTGCT ATCGGTGCGTGTGTTGCCGCTTGGAAAGGAGTAGCAATGCTTTGTTATGTAACGCCAAAAGAACATTTAGGGCTTCCTAA TGCCAAAGATGTGCGTGAGGGTATTTTAGCTTACAAAATTGCTGCACACGCTGCAGATATTGCTCGTGGGCGTATAGGTG CGCGTGATAGAGATGATGCAATGAGTGATGCACGATATAGTTTTGATTGGAATAGACAATTTGAACTTGCCTTAGACCCA GATAGAGCGCGTGAATACCACGATGAAGCCTTACCCCAAGAAGTATTTAAAGATGCCGAATTTTGCTCAATGTGTGGTCC AAAATTCTGTAGCTATAAAATCTCACAAGATATTTTTAAAGCCCATAATGCTAAAGAATCTGAAGATACTCAACCTCTAG CATCAAATCAATGA Protein sequence : MRTQWVQQRADDKIRTQLHYAKKGIITKEMEYVANIENISAELIRQEIERGRLIIPANINHTNLKPMGIGIATRTKINSN IGSSSLASSIDEEVEKVKVSIKYGADTIMDLSTGGDLDEIRTAVIQASSVPIGTVPIYQILYDVKNDILQLDIDTMLSVL KKQAKQGVSYFTIHCGFLLSHMPFVAKRKMGIVSRGGSLMASWMMHYHKENPFYEYFDEILKICQEYDVSLSLGDSLRPG CLADASDEAQFAELKVLGELAKRAWKADVQVMIEGPGHVPLNQIERNVELQKQYCNHAPFYVLGPLVTDIAAGYDHIASA IGACVAAWKGVAMLCYVTPKEHLGLPNAKDVREGILAYKIAAHAADIARGRIGARDRDDAMSDARYSFDWNRQFELALDP DRAREYHDEALPQEVFKDAEFCSMCGPKFCSYKISQDIFKAHNAKESEDTQPLASNQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 3e-105 | 59 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 3e-105 | 59 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 9e-101 | 55 |
