|
Name : CP0239 (CP0239) Accession : NP_858372.1 Strain : Genome accession: NC_004851 Putative virulence/resistance : Unknown Product : IS630 orf Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3335 EC number : - Position : 195760 - 196716 bp Length : 957 bp Strand : - Note : - DNA sequence : ATGGTAGTGTCCGCTATTGCCAGTACACCTCAGCTGCACCGGGGCGACCGTGTCAGCGACGTTGCCAGAACGCTCTGCTG CGCCCGCTCCTCTGTTGGACGCTGGATTAACTGGTTCACGCAGTCGGGTGTTGAGGGACTGAAATCATTACCTGCCGGGC GTGCCCGTCGCTGGCCGTTTGAGCATATCTGCACACTGTTACGTGAGCTGGTAAAACATTCTCCCGGCGACTTTGGCTAC CAGCGTTCACGCTGGAGTACAGAACTGCTGGCAATAAAAATCAATGAGATAACCGGTTGCCAGTTAAATGCCGGAACCGT TCGCCGCTGGTTGCCGTCTGTGGGGATTGTGTGGCGAAGGGCTGCGCCAACTCTGCGTATCCGTGACCCGCATAAAGATG AAAAGATGGCAGCAATCCATAAAGCACTGGACGAATGCAGCGCAGAGCATCCGGTCTTTTATGAAGATGAAGTGGATATC CATCTTCATCCCAAAATCGGTGCGGACTGGCAACTGCGCGGACAGCAAAAACGGGTGGTCACGCCGGGACAGAATGAAAA ATATTATCTGGCCGGAGCGCTGCACAGCGGGACAGGTAAAGTCAGCTATGTGGGCGGCAACAGCAAAAGTTCGGCGCTGT TCATCAGCCTGCTGAAGCGGCTTAAAGCGACATACCGTCGTGCGAAAACCATCACGCTGATCGTGGACAACTACATTATC CACAAAAGCCGGGAAACACAGAGCTGGCTGAAGGAGAACCCGAAGTTCAGGGGCATTTATCAGCCGGTTTACTCGCCATG GGTGAATCATGTTGAACGGCTATGGCAGGCACTTCACGACACAATAACGCGTAATCATCAGTGCCGCTCAATGTGGCAAC TGTTGAAAAAAGTTCGCCATTTTATGGAAACCGTCAGCCCATTCCCCGGAGGCAAACATGGGCTGGCAAAAGTGTAG Protein sequence : MVVSAIASTPQLHRGDRVSDVARTLCCARSSVGRWINWFTQSGVEGLKSLPAGRARRWPFEHICTLLRELVKHSPGDFGY QRSRWSTELLAIKINEITGCQLNAGTVRRWLPSVGIVWRRAAPTLRIRDPHKDEKMAAIHKALDECSAEHPVFYEDEVDI HLHPKIGADWQLRGQQKRVVTPGQNEKYYLAGALHSGTGKVSYVGGNSKSSALFISLLKRLKATYRRAKTITLIVDNYII HKSRETQSWLKENPKFRGIYQPVYSPWVNHVERLWQALHDTITRNHQCRSMWQLLKKVRHFMETVSPFPGGKHGLAKV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAP70294.1 | TnpA-like protein | Not tested | HPI | Protein | 9e-142 | 93 |
| Z4330 | NP_289555.1 | transposase | Not tested | OI-122 | Protein | 1e-107 | 87 |
| unnamed | AAL57563.1 | putative transposase | Not tested | LEE | Protein | 8e-108 | 87 |
| st46 | CAC81884.1 | ST46 protein | Not tested | LEE II | Protein | 8e-108 | 87 |
| IS630-like | CAI43817.1 | putative transposase | Not tested | LEE | Protein | 8e-108 | 87 |
| tnpA | AFL65914.1 | transposase | Not tested | SGI1-J6 | Protein | 2e-94 | 65 |
| api42 | CAF28516.1 | DNA binding protein | Not tested | YAPI | Protein | 3e-92 | 61 |
