|
Name : CP0020 (CP0020) Accession : NP_858153.1 Strain : Genome accession: NC_004851 Putative virulence/resistance : Unknown Product : ISSfl4 ORF3 Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 16028 - 17335 bp Length : 1308 bp Strand : + Note : - DNA sequence : ATGGACACCTCACTTGCTCATGAGAATGCCCGCCTGCGGGCACTGTTGCAGACGCAACAGGACACCATCCGCCAGATGGC GAAATACAACCGCCTGCTCTCACAGCGGGTGGCGGCTTATGCTTCCGAAATCAACCGGCTGAAGGCGCTGGTTGCGAAAC TGCAGCGCATGCAGTTCGGTAAAAGCTCAGAAAAACTTCGCGCAAAAACCGAACGGCAGATACTGGAAGCACAGGAGCGA ATCAGCGCACTTCAGGAAGAAATGGCGGAAACGCTGGGTGAGCAATATGACCCGGTACTGCCATCTCCCCTGCGCCAGTC TTCAGCCCGTAAACCGTTACCTGCCTCACTTCCCCGTGAAACCCGGGTCATCCGTCCGGAAGAGGAATGCTGCCCGGCCT GTGGTGGCGAACTCAGTTCTCTGGGATGTGATGTGTCAGAGCAGCTGGAGCTTATCAGCAGCGCCTTTAAGGTTATCGAA ACACAACGTCCGAAACTGGCCTGTTGCCGGTGTGACCATATCGTGCAGGCACCGGTGCCTTCAAAACCCATTGCACGCAG TTATGCCGGAGCGGGGCTTCTGGCCCATGTTGTTGCTGGAAAATATGCAGACTATCTGCCGTTATACCGCCAGTCAGAAA TATACCGTCGTCAGGGCGTGGAGCTGAGCCGTGCCACACTGGGGCGCTGGACAGGTGCTGTTGCTGAACTGCTGGAACCG CTGTATGACATCCTGCGCCAGTATGTGCTGATGCCCGGTAAAGTCCATGCCGATGATATCCCCGTTCCGGTCCAGGAGCC GGGCAGCGGTAAAACAAGGACTGCCCGGCTGTGGGTCTACGTTCGTGATGACCGTAACGCCGGTTCGGAAATGCCTCCGG CGGTCTGGTTCGCGTACTCACCGGACCGGAAAGGTATCCATCCACAGAATCATCTGGCCGGTTACAGCGGAGTGCTTCAG GCCGATGCTTACGGTGGTTACCGGGCGTTGTACGAATCCGGCAGAATAACGGAAGCCGCATGTATGGCTCATGTCCGGAG AAAAATCCACGATGTGCATGCAAGAGTGCCAACCGACATCACCACGGAAGCCCTGCAGCGTATCGGTGAACTGTATGCCA TCGAGGCAGAAGTCCGGGGATGTTCAGCAGAACAGCGTCTGGCGGCAAGAAAAGCCAGAGCCGCGCCACTGATGCAGTCA CTGTATGACTGGATACAGCAACAGATGAAAATTCATTCGCTGAAAATGGAATGTCTCCACGGAGAACACTATTATCCATC GGGAAATAGTGCGGGCAACAGTGTTTAG Protein sequence : MDTSLAHENARLRALLQTQQDTIRQMAKYNRLLSQRVAAYASEINRLKALVAKLQRMQFGKSSEKLRAKTERQILEAQER ISALQEEMAETLGEQYDPVLPSPLRQSSARKPLPASLPRETRVIRPEEECCPACGGELSSLGCDVSEQLELISSAFKVIE TQRPKLACCRCDHIVQAPVPSKPIARSYAGAGLLAHVVAGKYADYLPLYRQSEIYRRQGVELSRATLGRWTGAVAELLEP LYDILRQYVLMPGKVHADDIPVPVQEPGSGKTRTARLWVYVRDDRNAGSEMPPAVWFAYSPDRKGIHPQNHLAGYSGVLQ ADAYGGYRALYESGRITEAACMAHVRRKIHDVHARVPTDITTEALQRIGELYAIEAEVRGCSAEQRLAARKARAAPLMQS LYDWIQQQMKIHSLKMECLHGEHYYPSGNSAGNSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec53 | AAW51736.1 | Aec53 | Not tested | AGI-3 | Protein | 3e-164 | 98 |
| s0025 | CAD33772.1 | IS66-like transposase | Not tested | PAI I 536 | Protein | 2e-122 | 96 |
| Z4317 | NP_289543.1 | hypothetical protein | Not tested | OI-122 | Protein | 3e-111 | 63 |
| ECO103_3554 | YP_003223421.1 | hypothetical protein | Not tested | LEE | Protein | 2e-111 | 63 |
| st57 | CAC81895.1 | ST57 protein | Not tested | LEE II | Protein | 2e-83 | 59 |
| l0015 | CAD33775.1 | L0015 protein | Not tested | PAI I 536 | Protein | 3e-79 | 58 |
| tnp | AEA34686.1 | transposase | Not tested | Not named | Protein | 1e-88 | 58 |
| unnamed | AAL08460.1 | unknown | Not tested | SRL | Protein | 2e-86 | 57 |
| Z4337 | NP_289562.1 | hypothetical protein | Not tested | OI-122 | Protein | 2e-87 | 57 |
| unnamed | CAC39285.1 | hypothetical protein | Not tested | LPA | Protein | 2e-87 | 57 |
| Z5098 | NP_290249.1 | prophage-associated protein | Not tested | LEE | Protein | 2e-87 | 57 |
| unnamed | AAC31494.1 | L0015 | Not tested | LEE | Protein | 2e-87 | 57 |
| ECs4547 | NP_312574.1 | hypothetical protein | Not tested | LEE | Protein | 2e-87 | 57 |
| unnamed | ACU09439.1 | IS66 family element transposase | Not tested | LEE | Protein | 1e-87 | 57 |
| Z1131 | NP_286666.1 | hypothetical protein | Not tested | TAI | Protein | 1e-86 | 57 |
| Z1570 | NP_287074.1 | hypothetical protein | Not tested | TAI | Protein | 1e-86 | 57 |
| unnamed | AAL57570.1 | unknown | Not tested | LEE | Protein | 1e-87 | 57 |
| unnamed | CAI43806.1 | hypothetical protein | Not tested | LEE | Protein | 6e-88 | 57 |
| Z4340 | NP_289564.1 | hypothetical protein | Not tested | OI-122 | Protein | 7e-71 | 54 |
| tnp | AEA34687.1 | IS66 family transposase | Not tested | Not named | Protein | 2e-66 | 50 |
| BCAM0248 | YP_002232880.1 | putative transposase | Not tested | BcenGI11 | Protein | 1e-83 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CP0020 | NP_858153.1 | ISSfl4 ORF3 | VFG1513 | Protein | 1e-122 | 96 |
| CP0020 | NP_858153.1 | ISSfl4 ORF3 | VFG1516 | Protein | 2e-79 | 58 |
| CP0020 | NP_858153.1 | ISSfl4 ORF3 | VFG1051 | Protein | 9e-87 | 57 |
| CP0020 | NP_858153.1 | ISSfl4 ORF3 | VFG0793 | Protein | 9e-88 | 57 |
| CP0020 | NP_858153.1 | ISSfl4 ORF3 | VFG1736 | Protein | 2e-72 | 54 |
