Gene Information

Name : CP0210 (CP0210)
Accession : NP_858343.1
Strain :
Genome accession: NC_004851
Putative virulence/resistance : Unknown
Product : iso-IS1 ORF1
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3677
EC number : -
Position : 172967 - 173239 bp
Length : 273 bp
Strand : -
Note : -

DNA sequence :
ATGGCTACCGTTACTGTTCATTGTCCGCGCTGTCATTCCGATGAAGTTTATCGACATGGCCGTAGTTGTTCCCGGCATGA
GCGTTTCCGTTGTCGCTCATGTAAACGTGTTTTCCAGCTCACTTACTCTTATGAAGCCAGAAAACCCGGCGTTAAGGAGC
AGATCGTTGAAATGGCACATAACGGCGCAGGGGGCCGTGATACCGCCAGGACACTGAAAATCGGCATCAATACCGTCATA
CGGACATTAAAAAGCTCCCGCCCCGGCGGATAA

Protein sequence :
MATVTVHCPRCHSDEVYRHGRSCSRHERFRCRSCKRVFQLTYSYEARKPGVKEQIVEMAHNGAGGRDTARTLKIGINTVI
RTLKSSRPGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO21908.1 Iso-IS1 insA Not tested Not named Protein 6e-23 88
unnamed CAD66215.1 truncated InsA protein Not tested PAI III 536 Protein 5e-23 88
insA NP_458737.1 insertion element IS1 protein Not tested SPI-7 Protein 8e-16 44
InsA (Tn1) CAJ77071.1 Transposase Not tested AbaR1 Protein 6e-16 44
insA ADD91745.1 transposase Not tested PAI-I AL862 Protein 6e-16 44
EC042_4086 YP_006098369.1 transposase Not tested Tn2411 Protein 8e-16 44
insA AEZ06026.1 InsA Not tested AbaR24 Protein 6e-16 44
EC042_4114 YP_006098398.1 transposase Not tested Tn2411 Protein 8e-16 44
S4046 NP_839215.1 IS1 orfA Not tested SHI-2 Protein 5e-16 43
S4058 NP_839226.1 IS1 orfA Not tested SHI-2 Protein 5e-16 43
insA NP_709464.1 IS1 ORF1 Not tested SHI-2 Protein 8e-16 42
aec39 AAW51722.1 InsA Not tested AGI-3 Protein 8e-16 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CP0210 NP_858343.1 iso-IS1 ORF1 VFG1690 Protein 2e-23 88