Gene Information

Name : CP0204 (CP0204)
Accession : NP_858337.1
Strain :
Genome accession: NC_004851
Putative virulence/resistance : Unknown
Product : ISSfl4 ORF3
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3436
EC number : -
Position : 167760 - 169361 bp
Length : 1602 bp
Strand : -
Note : -

DNA sequence : 
ATGAACAATGAACTCCCCGATGATATTGAGCTGCTTAAAGCCATGTTGCGTAAGCAACAGAGTCGGCTTCGACAGTATGC
CTGTCAGGTCGCGGGCTATGAGCAGGAAATTGAACGGCTGAAAGCGCAACTCGACAGGTTGCGTCGTATGTTGTTCGGCC
AGAGTTCAGAGAAAAAGCGTCATAAGCTTGAAAATCAGATCCGACAGGCAGAAAAACGACTGTCGGAACTGGAAAACCGG
CTGAACACAGCCAGAAATCTTCTGGAAGATGCATCGTCAGTCACAGATTCACCTGACACCAGTCCCCCGTCAGAAAACCC
GATCGCCAGTAAGCCTGAATCCCCGGGACGAGAATCTTCACGAAAACCGCTGCCGGCAGAACTTCCCCGGGAGACACATC
GCCTTCTGCCTGCTGAAACCAGTTGCCCGGCCTGTGGAGGTGTTCTGAAAGAAATGGGGGAAACAATCTCAGAGCAACTG
GATATCATTAATACCGCCTTTAAAGTTATCGAAACCATACGTCCCAAACTGGCCTGTAGCCGGTGTGATGTCATCGTTCA
GGCACCACTTCCTCCTAAACCGATCGAACGCGGTTATGCCAGTGCAGGGTTACTTGCACGGATCCTGGTCAGCAAATATA
TGGAACATATCCCTTTATATCGCCAGTCAGAAATATACGCGCGACAGGGCGTGGAGCTGAGCCGTAATACCATGGTGCGC
TGGGTATCAGAAATGGCAGACAAACTCCGTCCTCTGTATATAGCGCTGAATGACTATGTTCTGGAGGCAGGAAAGGTGCA
CGCAGATGACACTCCGGTGAAAGTACTGGCCCCGGGGAACGGAAAGACGAAAACGGGTCGTCTGTGGGTATACGTCAGGG
ATGATCGTAATGCGGGTTCATCCCTGCCGGCAGCCGTCTGGTTCGCGTATTCGGCAGATCGCAAAGGAGAACATCCGCAG
CTCCACCTGGCAAAGTATCAGGGCGTACTGCAGGCTGATGCCTATGCAGGTTATAACGTACTGTACGAAACGGGCCGGGT
GAAGGAAGCCGGGTGCCTGGCCCACGCCCGCCGAAAAACCCATGACGAGGATGTGCGCCGTCCGACAGAAATGACTCAGG
AAGCGCTCAGACGGATAGCAGAGTTATACGACATAGAAGCGGAGATACGTGGCAGTCCGGCAGAGGAACGGCTTGCAGTC
AGAAAAGCCAGAAGCGTCCAGTTGATGCAGTCGTTGTACGACTGGATACAGTTGCAGAGGAAAACGCTGTCGAAACATGC
GGAGATGGCGAAGGCGTTCGACTATATCCTGAATCACTGGAATGCGCTGAACGAGTTCTGTCGTGACGGCTGGGTGGAAA
TAGACAACAACATCGGTGAAAACGCGTTACGATCGGTGGCGGTTGGAAGAAAAAATTATCTCTTTTTCGGCTCAGACAAG
GGAGGAGAAAGTGCGGCGATCATCTACAGTCTGCTGGTCACCTGCAAACAGAACGAAGTGGAGCCGGAGGACTGGTTGCG
CGAAGTGATCGAGAAGCTCAATGACTGGCCGTCGAACCAAGTGCATGAACTGCTGCCCTGGAACTTCTCGTCTGTAAAAT
AA

Protein sequence : 
MNNELPDDIELLKAMLRKQQSRLRQYACQVAGYEQEIERLKAQLDRLRRMLFGQSSEKKRHKLENQIRQAEKRLSELENR
LNTARNLLEDASSVTDSPDTSPPSENPIASKPESPGRESSRKPLPAELPRETHRLLPAETSCPACGGVLKEMGETISEQL
DIINTAFKVIETIRPKLACSRCDVIVQAPLPPKPIERGYASAGLLARILVSKYMEHIPLYRQSEIYARQGVELSRNTMVR
WVSEMADKLRPLYIALNDYVLEAGKVHADDTPVKVLAPGNGKTKTGRLWVYVRDDRNAGSSLPAAVWFAYSADRKGEHPQ
LHLAKYQGVLQADAYAGYNVLYETGRVKEAGCLAHARRKTHDEDVRRPTEMTQEALRRIAELYDIEAEIRGSPAEERLAV
RKARSVQLMQSLYDWIQLQRKTLSKHAEMAKAFDYILNHWNALNEFCRDGWVEIDNNIGENALRSVAVGRKNYLFFGSDK
GGESAAIIYSLLVTCKQNEVEPEDWLREVIEKLNDWPSNQVHELLPWNFSSVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 2e-150 64
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 9e-151 64
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 3e-128 61
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 1e-149 59
tnp AEA34686.1 transposase Not tested Not named Protein 3e-136 56
unnamed AAL57570.1 unknown Not tested LEE Protein 7e-135 56
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 5e-135 56
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 4e-116 56
unnamed AAC31494.1 L0015 Not tested LEE Protein 4e-135 55
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 3e-134 55
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 3e-134 55
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 1e-134 55
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 1e-134 55
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 5e-135 55
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 5e-135 55
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 5e-135 55
l0015 CAD33775.1 L0015 protein Not tested PAI I 536 Protein 1e-86 53
unnamed AAL08460.1 unknown Not tested SRL Protein 1e-96 53
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 4e-118 51
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 4e-118 51
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 7e-121 50
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 2e-75 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CP0204 NP_858337.1 ISSfl4 ORF3 VFG0793 Protein 2e-135 55
CP0204 NP_858337.1 ISSfl4 ORF3 VFG1516 Protein 8e-87 53
CP0204 NP_858337.1 ISSfl4 ORF3 VFG1051 Protein 6e-97 53
CP0204 NP_858337.1 ISSfl4 ORF3 VFG1736 Protein 3e-98 52