Gene Information

Name : mxiD (CP0145)
Accession : NP_858278.1
Strain :
Genome accession: NC_004851
Putative virulence/resistance : Virulence
Product : outermembrane protein MxiD
Function : -
COG functional category : N : Cell motility
COG ID : COG1450
EC number : -
Position : 123950 - 125650 bp
Length : 1701 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAAATTTAATATTAAATCTTTGACTCTCTTGATTGTATTGTTACCATTGATAGTTAATGCTAATAATATTGACTC
TCATTTATTAGAACAAAATGACATAGCGAAATATGTTGCTCAAAGTGATACGGTAGGATCTTTTTTTGAACGTTTTTCTG
CGTTATTAAATTATCCTATTGTTGTTAGCAAACAAGCTGCAAAAAAGAGAATATCTGGGGAGTTTGATTTATCTAATCCA
GAAGAAATGCTTGAAAAGCTGACATTACTTGTGGGACTCATATGGTATAAAGATGGAAATGCATTATACATATATGACTC
TGGAGAATTAATAAGCAAAGTTATTTTGCTGGAGAATATATCACTTAATTATCTTATTCAGTATCTGAAGGATGCTAACC
TTTATGATCACAGATATCCTATAAGAGGAAACATTAGTGATAAAACATTCTATATATCTGGTCCTCCGGCATTGGTTGAA
CTGGTAGCTAATACAGCAACTTTGCTTGATAAGCAGGTTTCTTCTATTGGGACAGATAAAGTTAATTTTGGGGTTATAAA
ATTAAAAAATACATTTGTTAGTGACAGAACTTATAATATGAGAGGGGAGGATATTGTCATCCCAGGGGTGGCTACTGTTG
TAGAACGTTTATTAAATAATGGTAAGGCTCTGAGTAACAGACAAGCCCAAAATGATCCGATGCCACCCTTTAATATTACA
CAGAAAGTATCTGAGGATAGTAATGACTTTTCATTTAGTTCAGTTACCAATAGTTCTATATTAGAGGATGTATCACTTAT
TGCATATCCAGAAACCAATTCTATATTAGTCAAAGGTAATGATCAGCAAATACAGATTATTCGCGATATTATCACTCAGT
TAGATATAGCCAAACGACATATAGAATTATCATTATGGATAATCGATATTGATAAATCTGAATTAAATAACCTTGGTGTT
AATTGGCAAGGAACGGCTTCATTTGGTGATTCGTTTGGTGCGTCATTTAATATGAGCTCATCAGCATCGATAAGCACTTT
GGACGGCAATAAGTTTATTGCTTCAGTTATGGCATTAAATCAGAAAAAGAAAGCAAATGTAGTTTCAAGGCCGGTGATTT
TGACACAAGAGAATATTCCGGCTATATTTGATAATAACAGGACTTTTTATGTGTCATTAGTTGGTGAGCGCAATTCTTCG
TTGGAGCATGTTACGTATGGAACATTGATAAATGTTATACCTCGCTTTTCATCTCGGGGACAAATTGAGATGTCTTTAAC
GATAGAGGATGGAACAGGAAATAGTCAGTCAAATTACAATTATAATAATGAAAATACATCTGTCCTTCCAGAAGTTGGAA
GGACCAAAATCAGTACAATAGCGAGAGTTCCACAAGGCAAAAGTTTGTTGATAGGTGGTTATACGCATGAAACGAACTCT
AACGAAATAATATCTATTCCTTTTCTCTCCTCTATTCCTGTAATCGGTAATGTGTTCAAGTATAAAACAAGTAATATCAG
TAATATTGTAAGGGTTTTTCTGATTCAACCCCGTGAGATAAAGGAGTCAAGTTATTATAATACTGCAGAATATAAAAGCC
TCATATCTGAAAGAGAAATACAAAAGACTACACAAATAATCCCATCTGAAACTACTTTGCTGGAAGACGAAAAATCATTG
GTTTCATACTTAAATTACTAA

Protein sequence :
MKKFNIKSLTLLIVLLPLIVNANNIDSHLLEQNDIAKYVAQSDTVGSFFERFSALLNYPIVVSKQAAKKRISGEFDLSNP
EEMLEKLTLLVGLIWYKDGNALYIYDSGELISKVILLENISLNYLIQYLKDANLYDHRYPIRGNISDKTFYISGPPALVE
LVANTATLLDKQVSSIGTDKVNFGVIKLKNTFVSDRTYNMRGEDIVIPGVATVVERLLNNGKALSNRQAQNDPMPPFNIT
QKVSEDSNDFSFSSVTNSSILEDVSLIAYPETNSILVKGNDQQIQIIRDIITQLDIAKRHIELSLWIIDIDKSELNNLGV
NWQGTASFGDSFGASFNMSSSASISTLDGNKFIASVMALNQKKKANVVSRPVILTQENIPAIFDNNRTFYVSLVGERNSS
LEHVTYGTLINVIPRFSSRGQIEMSLTIEDGTGNSQSNYNYNNENTSVLPEVGRTKISTIARVPQGKSLLIGGYTHETNS
NEIISIPFLSSIPVIGNVFKYKTSNISNIVRVFLIQPREIKESSYYNTAEYKSLISEREIQKTTQIIPSETTLLEDEKSL
VSYLNY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs3733 NP_311760.1 EivG Not tested LIM Protein 1e-109 50
invG NP_461819.1 outer membrane secretin precursor Virulence SPI-1 Protein 2e-119 50
invG NP_457292.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 3e-118 50
invG NP_806501.1 virulence-associated secretory protein Virulence SPI-1 Protein 3e-118 50
invG YP_217817.1 invasion protein; outer membrane Virulence SPI-1 Protein 3e-119 50
invG AAS66859.1 InvG Not tested SSR-2 Protein 8e-104 49
ysaC AAS66838.1 YsaC Not tested SSR-1 Protein 3e-77 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mxiD NP_858278.1 outermembrane protein MxiD VFG1004 Protein 0.0 100
mxiD NP_858278.1 outermembrane protein MxiD VFG0559 Protein 1e-119 50