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Name : ipgD (CP0133) Accession : NP_858266.1 Strain : Genome accession: NC_004851 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 116362 - 117978 bp Length : 1617 bp Strand : + Note : - DNA sequence : ATGCACATAACTAATTTGGGATTGCATCAGGTTTCATTTCAAAGCGGAGATTCCTATAAAGGCGCAGAAGAAACCGGAAA GCACAAAGGTGTAAGCGTGATTTCATATCAAAGAGTTAAAAATGGAGAAAGAAATAAGGGGATCGAAGCGCTTAATCGAT TATATTTACAGAACCAAACAAGCTTAACAGGAAAAAGCCTTTTGTTTGCGCGTGACAGAGCTGAAGTTTTTTGCGAGGCA ATAAAGTTGGCAGGTGGTGATACGTCAAAAATTAAAGCCATGATGGAACGATTAGATACCTATAAACTTGGTGAAGTTAA TAAAAGACATATTAATGAGCTTAATAAAGTAATAAGTGAAGAGATAAGAGCACAGCTAGGCATTAAAAATAAAAAGGAAT TGCAAACGAAAATAAAACAAATATTTACTGATTATTTAAATAATAAGAATTGGGGACCGGTCGACAAGAATATTAGTCAT CATGGGAAAAATTATGGTTTTCAATTAACTCCTGCCTCTCATATGAAGATAGGGAATAAAAATATATTTGTCAAAGAGTA TAATGGAAAAGGAATTTGTTGTGCTTCTACGAGAGAGAGTGATCATATCGCGAATATGTGGCTTTCAAAAGTGGTGGATG ATGAGGGGAAGGAAATTTTTTCGGGTATCAGACATGGAGTTATATCAGCCTATGGATTGAAAAAAAACTCATCTGAAAGA GCTGTTGCTGCTCGTAATAAAGCTGAGGAGTTAGTAAGCGCAGCATTATATAGCAGACCAGAGTTATTATCACAGGCTTT GTCTGGTAAAACAGTAGATTTAAAGATTGTTTCGACTTCTCTTCTGACGCCGACCAGTTTAACCGGGGGAGAGGAGAGTA TGTTAAAAGATCAGGTGAACGCATTAAAAGGGTTAAACTCTAAAAGGGGGGAGCCAACGAAATTATTAATTCGGAATAGT GATGGTCTTCTGAAAGAAGTAAGCGTTAATCTAAAAGTGGTGACATTTAACTTTGGTGTAAATGAATTAGCGCTAAAAAT GGGCTTAGGCTGGAGGAATGTTGACAAGCTTAATGATGAATCAATATGTTCTTTGTTGGGGGATAATTTCCTCAAAAATG GTGTGATTGGAGGTTGGGCTGCAGAAGCAATAGAAAAAAATCCACCATGTAAGAATGATGTGATATATCTGGCTAACCAG ATAAAAGAGATTGTAACCAAAAAGTTACAAAAAAATGATAATGGAGAGCCGTATAAATTGTCACAAAGAATGACTCTATT GGCTTATACTATAGGTGCTGTGCCTTGCTGGAATTGTAAGAGTGGGAAGGACAGAACAGGTATGCAGGATGCTGAAATTA AAAGAGAAATAATAAGAAAACATGAAACAGGTCAGTTTTCTCAATTAAATAGTAAATTATCCTCAGAAGAGAAAAGATTA TTTTCTACTATTCTAATGAATAGTGGTAATATGGAAATCCAAGAGATGAATACTGGTGTGCCCGGAAATAAAGTCATGAA AAAATTGCCGCTATCTTCGTTAGAGCTATCTTATTCTGAAAGAATAGGGGACCCAAAAATATGGAATATGGTGAAAGGGT ATTCGTCATTTGTATAA Protein sequence : MHITNLGLHQVSFQSGDSYKGAEETGKHKGVSVISYQRVKNGERNKGIEALNRLYLQNQTSLTGKSLLFARDRAEVFCEA IKLAGGDTSKIKAMMERLDTYKLGEVNKRHINELNKVISEEIRAQLGIKNKKELQTKIKQIFTDYLNNKNWGPVDKNISH HGKNYGFQLTPASHMKIGNKNIFVKEYNGKGICCASTRESDHIANMWLSKVVDDEGKEIFSGIRHGVISAYGLKKNSSER AVAARNKAEELVSAALYSRPELLSQALSGKTVDLKIVSTSLLTPTSLTGGEESMLKDQVNALKGLNSKRGEPTKLLIRNS DGLLKEVSVNLKVVTFNFGVNELALKMGLGWRNVDKLNDESICSLLGDNFLKNGVIGGWAAEAIEKNPPCKNDVIYLANQ IKEIVTKKLQKNDNGEPYKLSQRMTLLAYTIGAVPCWNCKSGKDRTGMQDAEIKREIIRKHETGQFSQLNSKLSSEEKRL FSTILMNSGNMEIQEMNTGVPGNKVMKKLPLSSLELSYSERIGDPKIWNMVKGYSSFV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sopB | AAK27357.1 | SopB | Virulence | SPI-5 | Protein | 1e-78 | 46 |
| sopB | AAK27355.1 | SopB | Virulence | SPI-5 | Protein | 1e-71 | 45 |
| sopB | AAK27356.1 | SopB | Virulence | SPI-5 | Protein | 5e-72 | 45 |
| sopB | YP_216030.1 | outer protein | Virulence | SPI-5 | Protein | 2e-75 | 41 |
| sopB | NP_460064.1 | secreted effector protein | Virulence | SPI-5 | Protein | 2e-75 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ipgD | NP_858266.1 | hypothetical protein | VFG0992 | Protein | 0.0 | 100 |
| ipgD | NP_858266.1 | hypothetical protein | VFG0465 | Protein | 1e-75 | 41 |
