|
Name : serS (AM759) Accession : YP_153958.2 Strain : Anaplasma marginale St. Maries Genome accession: NC_004842 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 695774 - 697063 bp Length : 1290 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : GTGCACGACATTGAGCTTATTAAAAAAGACCCTGAGCTGTTTGACAGGGCCATGATATCCCGTGGCTTTGGTGAGCAGGC GGAAAAAATCATCGAATTAGATCTAAAAAAGAGGGGGGAGCTGTCTACTTTGTATTCCCTACGAGAACAACGAAACGCAG TAACGCGGGAGGTGGCCCTCTTGAAGCGTAGCGGAATCGAGTGCACACCCCAAATCGAGGCCTCCAAGAAACTGGCTGAA GAGATCGCAACACTTGAGCACAGTATTAAGGAGGACACGAAACTTTCCAACTTACTTGAAAGCCTCCCTAATGTCCCTGA CCCTATAGTGCCGGTAGGCAAAGATGAGAGTCATAACGTTGAAGTGCGGTCACACGGACAGAGGAGAGATTTCGCTTTTG GTATCAGGCCCCATTATGAGCTTGGCGAAATGCTGAATTTGTTGGATTTCAAGCGCGCCGCAGTGCTGTCTGGAGCCAGA TTTTCCATTTTAAAAGGTCAGCTTGCGGAGCTAGAGAGAGCACTTGCAAGCTTTATGCTAGATATGCACACCAAGGAGTT TGGGTATACAGAAATATCACATCCAGTCTTGGTGAACGAGCGCACAATGTACAACGTGGGTCAATTACCAAAGTTTCACG ATGATTCTTTCCGCACTACAAACAACTTCAGGCTTGCACCGACCAGTGAAGTTGCACTGGCTAATCTGGTATCGGGAACA ACGCTCCCACGTGACTCCTTGCCGATGAGATTTACGGCATATTCCCAATGCTTTAGGGCAGAAGCTGGAAGTGCCGGCCT AGATACGCGGGGCATGATGCGACAGCATCAATTTGGCAAGGTGGAGCTCGTTAGTATTACTACAAGCGACGCATCAAATG CTGAGCTTGAGAGGATGACTTCAATCGCGGAAGAGGTACTGAAGAGGCTAGAACTCCCGTATAGAGTTATGCTATTATGT TCAGGGGATATGGGGTTTTCCGCAAGCATTTCTTACGACTTGGAAGTGTGGATGCCGGCCCAGGACAAGTATAGGGAGAT TTCCAGCTGCTCAAACTGTAGGGATTTTCAAGCCCGAAGGATGGGGGCGAAGTATTTCTTCTTCGAGAACAAGAAAAAGC ACTCCACACTGGTACATACCCTAAACGGTTCTGCGCTCGCTATCGGGAGGACAATAGCCGCTATCATGGAGAACTATCAG AACGAAGATGGATCCATCACTATCCCAGACGTGCTCAGAAAGTACACCGGAGCAAGCGCAATAATGCGCGCAGAAGATGC CCTGCCTTGA Protein sequence : MHDIELIKKDPELFDRAMISRGFGEQAEKIIELDLKKRGELSTLYSLREQRNAVTREVALLKRSGIECTPQIEASKKLAE EIATLEHSIKEDTKLSNLLESLPNVPDPIVPVGKDESHNVEVRSHGQRRDFAFGIRPHYELGEMLNLLDFKRAAVLSGAR FSILKGQLAELERALASFMLDMHTKEFGYTEISHPVLVNERTMYNVGQLPKFHDDSFRTTNNFRLAPTSEVALANLVSGT TLPRDSLPMRFTAYSQCFRAEAGSAGLDTRGMMRQHQFGKVELVSITTSDASNAELERMTSIAEEVLKRLELPYRVMLLC SGDMGFSASISYDLEVWMPAQDKYREISSCSNCRDFQARRMGAKYFFFENKKKHSTLVHTLNGSALAIGRTIAAIMENYQ NEDGSITIPDVLRKYTGASAIMRAEDALP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-92 | 48 |
