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Name : Y1099 (Y1099) Accession : NP_857880.1 Strain : Genome accession: NC_004838 Putative virulence/resistance : Virulence Product : F1 capsule Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 79152 - 81653 bp Length : 2502 bp Strand : + Note : o833; similar to gi|48622 DNA sequence : ATGAGGTATTCAAAGCTGTTCCTGTGTGCAGGGTTAACTTTGGCAACATTGCCTTGTTGGGGACGCGCATATACTTTTGA CTCTACTATGCTTGATACGAATAGTGGAGAGAGTATAGATGTATCTCTTTTTAATCAAGGACTTCAACTTCCAGGTAATT ATTTTGTTAATGTTTTTGTAAATGGTCGAAAGGTAGACTCTGGAAATATCGACTTCCGTCTAGAAAAACATAATGGAAAA GAACTTCTTTGGCCATGCCTATCATCCTTACAATTGACAAAGTATGGCATTGATATAGATAAATATCCTGATTTAATAAA ATCTGGTACAGAGCAATGTGTTGATTTATTAGCAATACCACATTCAGATGTGCAGTTTTATTTTAATCAGCAGAAATTAT CGTTAATTGTGCCACCACAGGCACTTTTACCTAGATTTGATGGCATTATGCCAATGCAATTGTGGGATGACGGCATTCCT GCTCTGTTCATGAATTATAATACGAACATGCAGACAAGAAAATTCAGAGAAGGAGGCAAGTCTCTGGACTCTTATTATGC TCAGTTGCAACCGGGATTAAACATAGGGGCTTGGCGCTTTCGTAGTTCAACCTCATGGTGGAAACAACAAGGATGGCAGC GTTCGTATATTTATGCCGAGCGAGGATTGAATACAATTAAGAGCCGTTTGACATTGGGGGAAACCTATTCTGATAGCAGT ATCTTTGACAGTATCCCGATTAAGGGGATAAAAATTGCTTCAGATGAATCGATGGTTCCTTATTACCAATGGAATTTTGC TCCAGTTGTTCGCGGTATCGCACGTACACAAGCCAGGGTAGAGGTTTTAAGAGATGGCTACACTGTAAGTAATGAGTTGG TGCCCTCGGGACCATTTGAGTTAGCAAATCTTCCTCTGGGTGGGGGGAGTGGTGAGCTGAAAGTCATCATTCATGAAAGT GATGGAACAAAGCAAGTTTTTACAGTTCCATATGACACACCAGCAGTGGCATTACGGAAGGGCTATTTCGAATATTCAAT GATGGGGGGAGAATATCGTCCAGCTAATGATCTTACACAAACATCGTATGTTGGCGCTCTTGGGATGAAATATGGTTTGC CAAGGAATCTTACGTTATATGGTGGACTACAAGGGTCCCAAAATTATCATGCCGCAGCTCTGGGTATCGGTGCTATGTTG GGTGATTTTGGTGCCATATCTACAGATGTTACTCAAGCAGACAGCCAGAAAAATAAACAAAAAAAAGAAAGCGGCCAACG TTGGCGCGTTCGATATAATAAGTACTTGCAGAGTGGAACATCGTTAAACATTGCTAGCGAGGAATACGCCACAGAAGGAT TTAACAAACTCGCTGACACGTTAAATACTTATTGTAAACCTAATACTAGAAACGATTGCCGTTTTGATTATGCTAAACCC AAAAACAAAGTGCAATTCAATTTAAGTCAAAGCATACCTGGTTCGGGGACGCTTAATTTCAGTGGCTACAGAAAAAACTA TTGGCGTGACAGTAGGAGCACAACTTCTTTTTCTGTAGGCTATAACCATTTTTTTAGGAATGGTATGTCATTGACTTTAA ATTTATCGAAGACACAGAATATCAATAAGTATGGAGAAAAAACTAGTGAGCTATTATCTAATATCTGGTTGAGTTTTCCT CTCAGTCGCTGGCTAGGTAATAACTCAATAAATTCAAATTACCAAATGACATCAGATTCTCATGGTAACACTACCCATGA GGTAGGTGTGTACGGTGAAGCCTTTGATCGCCAATTATACTGGGACGTTCGCGAACGTTTTAATGAAAAGGGCAGAAAAT ATACCTCCAATGCACTGAATTTGAATTATCGAGGAACTTATGGGGAGATCAGTGGTAACTACAGCTACGATCAAACCCAA AGCCAACTTGGTATAGGTGTAAATGGCAATATGGTAATAACTCAGTACGGTATAACGGCTGGCCAAAAAACTGGAGATAC TATTGCATTAGTACAAGCCCCTGATATAAGCGGTGCTTCAGTGGGATACTGGCCAGGCATGAAAACAGACTTTAGGGGGT ACACCAATTATGGTTACTTAACCCCTTACAGAGAGAATAAGGTAGAAATTAACCCAGTTACTTTACCCAATGATGCAGAG ATAACAAATAATATTGTTAGCGTGATCCCGACAAAGGGAGCTGTAGTATTAGCAAAATTTAACGCAAGGATTGGTGGACG ATTGTTTTTACATTTAAAACGCTCTGACAATAAACCTGTTCCATTTGGTTCTATAGTTACCATTGAAGGGCAATCATCCA GCTCTGGCATTGTCGGAGATAATAGCGGTGTCTATTTGACTGGACTACCTAAAAAATCAAAAATACTTGTTAAGTGGGGG AGAGATAAAAATCAATCATGTTCATCTAATGTAGTTCTACCAGAAAAAACGGATATTTCTGGTGCTTATAGGTTATCCAC AACCTGCATCTTAAATAACTGA Protein sequence : MRYSKLFLCAGLTLATLPCWGRAYTFDSTMLDTNSGESIDVSLFNQGLQLPGNYFVNVFVNGRKVDSGNIDFRLEKHNGK ELLWPCLSSLQLTKYGIDIDKYPDLIKSGTEQCVDLLAIPHSDVQFYFNQQKLSLIVPPQALLPRFDGIMPMQLWDDGIP ALFMNYNTNMQTRKFREGGKSLDSYYAQLQPGLNIGAWRFRSSTSWWKQQGWQRSYIYAERGLNTIKSRLTLGETYSDSS IFDSIPIKGIKIASDESMVPYYQWNFAPVVRGIARTQARVEVLRDGYTVSNELVPSGPFELANLPLGGGSGELKVIIHES DGTKQVFTVPYDTPAVALRKGYFEYSMMGGEYRPANDLTQTSYVGALGMKYGLPRNLTLYGGLQGSQNYHAAALGIGAML GDFGAISTDVTQADSQKNKQKKESGQRWRVRYNKYLQSGTSLNIASEEYATEGFNKLADTLNTYCKPNTRNDCRFDYAKP KNKVQFNLSQSIPGSGTLNFSGYRKNYWRDSRSTTSFSVGYNHFFRNGMSLTLNLSKTQNINKYGEKTSELLSNIWLSFP LSRWLGNNSINSNYQMTSDSHGNTTHEVGVYGEAFDRQLYWDVRERFNEKGRKYTSNALNLNYRGTYGEISGNYSYDQTQ SQLGIGVNGNMVITQYGITAGQKTGDTIALVQAPDISGASVGYWPGMKTDFRGYTNYGYLTPYRENKVEINPVTLPNDAE ITNNIVSVIPTKGAVVLAKFNARIGGRLFLHLKRSDNKPVPFGSIVTIEGQSSSSGIVGDNSGVYLTGLPKKSKILVKWG RDKNQSCSSNVVLPEKTDISGAYRLSTTCILNN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| safC | NP_454907.1 | outer-membrane fimbrial usher protein | Not tested | SPI-6 | Protein | 1e-174 | 44 |
| afaC | ADD91743.1 | putative AfaC-VIII usher protein | Not tested | PAI-I AL862 | Protein | 2e-162 | 44 |
| afaC | AAD44022.2 | AfaC | Virulence | PAI-I AL862 | Protein | 5e-161 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Y1099 | NP_857880.1 | F1 capsule | VFG0419 | Protein | 0.0 | 100 |
| Y1099 | NP_857880.1 | F1 capsule | VFG0944 | Protein | 1e-165 | 44 |
| Y1099 | NP_857880.1 | F1 capsule | VFG0853 | Protein | 4e-166 | 43 |
| Y1099 | NP_857880.1 | F1 capsule | VFG0849 | Protein | 8e-150 | 41 |
| Y1099 | NP_857880.1 | F1 capsule | VFG0857 | Protein | 8e-156 | 41 |
