|
Name : ribD (NE0793) Accession : NP_840867.1 Strain : Nitrosomonas europaea ATCC 19718 Genome accession: NC_004757 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis bifunctional RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 3.5.4.26 Position : 861712 - 862803 bp Length : 1092 bp Strand : + Note : similar to (NC_003295) PROBABLE RIBOFLAVIN BIOSYNTHESIS BIFUNCTIONAL RIBD, evalue=1.00e-101, 52% identity DNA sequence : GTGTTCACCGCTTTGGATTATGAGTATATGTCCCATGCGCTGCGGCTGGCCGAAAGGGGGCTGTTTACCACCAGCCCGAA TCCTCGGGTAGGGTGCGTAATCGTCAATGGCGGCAAGGTAGTTGGAACAGGGTGGCATGAGCGGGCAGGGGAGCCACATG CAGAAATTCATGCATTACGGAAAGCAGGGGATTTGGCCAAGGGCGCTACTGTTTATGTAACACTCGAGCCTTGCAGTCAT CATGGCCGTACACCACCTTGCGTCGAGGCTTTGATTCAGGCAGGGGTGTGCAAAGTAGTCATGGCGATGAATGACCCTAA TCCGCATGTAAACGGTCAAGGAAAGGAATGGTTGCAGAAAGCCGGTATCGCAATACAAGCAGGTTTGCTGGCTGATCAAG CAGAGCGATTGAATATCGGATTTGTTACCCGAATGCGACATGATCGTCCATGGGTGCGGACTAAGATAGCAGCCAGCTTC GATGGCAGAACGGCTCTGAAGAATGGAAAGAGCCAGTGGATTACCAGTGAGCCGGCTCGGCGGGATGGCCATAAATGGCG AGCACGTTCATGTGCGATACTGACAGGGATCAGCTCGGTCAGGAAGGATGACCCTCAACTGACGGTGCGGTATATTACGG TCTCCAGGCAGCCAATGCGCATAGTGGTGGATTCGAACCTGGAAACTCCCTTGCAGGCAAAGTTGCTGCAGAATGCAGAT ACAACTTGGATCTTCACGGCACAGACCAGCAAAGAAAAAATACACCGACTGGAAGATACCGGTGCTCACATCGTTGTTTT GCCTGATTTGGCCGGAAAGGTTGATCTCAAAGCCATGATGGTGAAGTTGGCCGAATTAGGTATCAATGAGCTGCTGGTTG AAGCAGGCCCGGTACTGAACGGAGCGCTGGTAACAGCTGGGCTGGTGGATGAAATCATTTTTTATTTTGCCCCCAGCCTG TTGGGTAATTCAGCACAAGCGATGCTGGCATTGCCTGAAATCGGGGATTTATCAGAGAAGTATGATTTGCAAATATCCGA TATTCGAAAAATCGGGATGGATGTCCGTCTGATAGCAAGGTTTATGAAATGA Protein sequence : MFTALDYEYMSHALRLAERGLFTTSPNPRVGCVIVNGGKVVGTGWHERAGEPHAEIHALRKAGDLAKGATVYVTLEPCSH HGRTPPCVEALIQAGVCKVVMAMNDPNPHVNGQGKEWLQKAGIAIQAGLLADQAERLNIGFVTRMRHDRPWVRTKIAASF DGRTALKNGKSQWITSEPARRDGHKWRARSCAILTGISSVRKDDPQLTVRYITVSRQPMRIVVDSNLETPLQAKLLQNAD TTWIFTAQTSKEKIHRLEDTGAHIVVLPDLAGKVDLKAMMVKLAELGINELLVEAGPVLNGALVTAGLVDEIIFYFAPSL LGNSAQAMLALPEIGDLSEKYDLQISDIRKIGMDVRLIARFMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 2e-59 | 44 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 2e-59 | 44 |
