Gene Information

Name : tnpR (NE0751)
Accession : NP_840826.1
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Virulence
Product : site-specific recombinase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 813230 - 813790 bp
Length : 561 bp
Strand : +
Note : -

DNA sequence :
TTGCCAGGTAAGCGCATTGGTTATGTTCGGGTCAGCAGCTTTGACCAAAATCCTGAACGGCAACTGGAAGGCATTCAGGT
TGATCGCGTGTTCACTGATAAGGCATCGGGTAAAGATATCCAGCGACCACAACTCGATATGTTGCTGGATTTTGTGCGTG
AGGACGATACAGTCGTCGTCCATAGTATGGATCGCCTGGCACGCAACCTAGATGACCTGCGTCGTCTGGTACAAGATCTT
ACCGGTCGTGGTATCCGAGTCGAATTTGTCAAAGAAGGATTAATTTTTACCGGTGAAGATTCTCCGATGGCCAACCTGAT
GCTGTCGGTCATGGGATCTTTTGCGGAGTTTGAGCGTGCTCTGATCCGCGAACGGCAGCGCGAAGGTATTACACTTGCCA
AACAGCGAGGTGCCTATAGGGGTCGCAAGAAATCGCTGAACAGCGAACAGGTTGCGGAATTAAAGCGAAGGGTCGTAGCA
GGCGAACAAAAAGCGCTCATCGCCCGCAGCTTTGGTATCAGCCGCGAAACGCTTTACCAATATCTGAAAACAGTAGATTG
A

Protein sequence :
MPGKRIGYVRVSSFDQNPERQLEGIQVDRVFTDKASGKDIQRPQLDMLLDFVREDDTVVVHSMDRLARNLDDLRRLVQDL
TGRGIRVEFVKEGLIFTGEDSPMANLMLSVMGSFAEFERALIRERQREGITLAKQRGAYRGRKKSLNSEQVAELKRRVVA
GEQKALIARSFGISRETLYQYLKTVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACF06154.1 resolvase Not tested Tn5036-like Protein 4e-66 86
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 2e-62 80
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 1e-62 80
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 1e-62 80
tnpR ACY75537.1 TnpR Not tested Tn6060 Protein 3e-62 79
res YP_005124341.1 DNA-invertase Not tested Not named Protein 3e-23 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnpR NP_840826.1 site-specific recombinase VFG1030 Protein 6e-63 80