Gene Information

Name : fliP (NE0461)
Accession : NP_840547.1
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 502906 - 503712 bp
Length : 807 bp
Strand : -
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence :
ATGAACGATAAATTACCAGCCCATCCCAAAACCAGCTTCCGGCACAGTCTGCCCAAACGCTCCATCAATTGCGGCATCCT
GTTGCTGGTTGCGGGAATCGGCGTTGCCGGCCCGGTGCTGGCTCAGAAAACAGGATTTCCTGCCGTTACCAGCACCCCTG
CAGCGGGAGGGGGCGCTACCTATACCCTCAGCCTGCAGACTCTGCTGCTGCTGACTTCGCTGACGTTTCTGCCAGCCGTC
ATCCTGATGATGTCCAGCTTCACCCGTATCATCATCGTTCTGTCACTGTTGCGCCAAGCGATGGGCACACAATCCTCCCC
GCCCAATCAGGTACTGCTCGGCCTGGCACTGTTCCTGTCTTTCTTCATCATGTCGCCGGTCATCGACAAGGTTTATACGG
AAGCGTACCTGCCGTTCTCGGAAGATAAAATCAGCATCGTCGAAGCGATGGAAAAGGCGGGAGATCCGCTCAAATCCTTC
ATGCTGCGCCAGACGCGCGAAGCAGATATCGCCCTGTTTGCCCGGATTGCCGAAAACGGAGAAATCGAAAGCCCGGATCA
GGTACCGATGAAAATCCTGGTGCCTGCCTATATTACCAGTGAGTTGAAAACCGCCTTCCAGATCGGATTTGTCGTATTCA
TCCCCTTTCTGATCATCGATATGGTCGTTGCCAGCACGCTGATGGCCATGGGGATGATGATGCTGTCACCCATGATCATT
TCGCTGCCGTTCAAGCTGATGCTGTTCGTGCTGGTCGATGGCTGGAATCTGCTGATCGGTTCGCTCACCCAGAGTTTCTA
CGTCTGA

Protein sequence :
MNDKLPAHPKTSFRHSLPKRSINCGILLLVAGIGVAGPVLAQKTGFPAVTSTPAAGGGATYTLSLQTLLLLTSLTFLPAV
ILMMSSFTRIIIVLSLLRQAMGTQSSPPNQVLLGLALFLSFFIMSPVIDKVYTEAYLPFSEDKISIVEAMEKAGDPLKSF
MLRQTREADIALFARIAENGEIESPDQVPMKILVPAYITSELKTAFQIGFVVFIPFLIIDMVVASTLMAMGMMMLSPMII
SLPFKLMLFVLVDGWNLLIGSLTQSFYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 2e-20 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 2e-20 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 2e-20 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP NP_840547.1 flagellar biosynthesis protein FliP VFG2338 Protein 1e-63 69
fliP NP_840547.1 flagellar biosynthesis protein FliP VFG2494 Protein 4e-60 67
fliP NP_840547.1 flagellar biosynthesis protein FliP VFG1259 Protein 9e-52 65
fliP NP_840547.1 flagellar biosynthesis protein FliP VFG2016 Protein 2e-47 57
fliP NP_840547.1 flagellar biosynthesis protein FliP VFG0044 Protein 6e-28 43
fliP NP_840547.1 flagellar biosynthesis protein FliP VFG0188 Protein 2e-23 41