|
Name : thiC (NE0038) Accession : NP_840139.1 Strain : Nitrosomonas europaea ATCC 19718 Genome accession: NC_004757 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 50259 - 52157 bp Length : 1899 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAAAACGCCCGTTTCTAAGCTGGAAAAATTCACCAATGACAATGCCCGGGTAGATACGGCAGCAGTACAGCCATTGCC CAATTCACGCAAGATTTATATTCAGGGTTCGCGTGCCGATATCCAGGTGCCAATGCGCGAAATCACCCAATCTGACACTG CTACCGGACGGGGAGCAGAAAAAAACCCGCCAATCTATGTCTATGATACTTCCGGCCCCTATACTGATCCTGACACTCGC ATAGATATACGCCATGGCTTGCCTCCTTTGCGCGAAAAATGGATTGATGAACGCGGGGATACCGAAATTCTCACCGGACT GTCCTCGAGTTACAGTCTGAAAAGGCTGCAGGATCCCGCTCTGACGAAGATGCGCTTCAATCTGATGCGTCCGGTTCGGC ATGCTAGGAATGGCGCCAATGTCACCCAGATGCACTATGCCAGACGCGGCATCATCACGCCGGAGATGGAATTTATCGCA CTCCGGGAAAATCAGCGCAGAGAGCGTGTTGCTGATCTGGCAAGTAATGAGTTGTTGAACCGGCAGCATCCCGGACAGAG TTTCGGTGCAATAATTCAGGAGTGGATCACGCCAGAATTCGTTCGTGATGAAGTAGCATGCGGACGTGCCATCATTCCCG CCAACATCAATCACCCGGAAACGGAGCCAATGATCATCGGTCGCAATTTTCTGGTCAAGATCAACGCCAATATCGGTAAT TCCGCACTGGGTTCCAGCATTCAGGATGAGGTGGAGAAAATGACCTGGGCGATCCGCTGGGGAGGAGATACGGTCATGGA TCTGTCCACCGGAAAAAATATTCATGAGACACGTGAGTGGATTATTCGCAACAGTCCGGTTCCGATTGGAACCGTGCCCA TTTATCAGGCACTGGAAAAAGTGGATGGCAAAGCGGAAGAGCTGACTTGGGAAATTTTTCGCGATACATTGATCGAGCAG GCAGAACAGGGAGTGGATTACTTTACGATTCATGCCGGAGTGCGCCTGCCTTTCATTCCGATGACAGCCAAGCGGATGAC CGGTATCGTTTCGCGTGGAGGTTCCATCATGGCTAAATGGTGCCTGGCGCACCATCAGGAAAGCTTCCTGTATACACATT TTGAAGATATCTGCGAAATCATGAAGGCCTATGATGTCAGCTTTTCTCTGGGTGACGGATTACGCCCCGGTTCGATTTAC GACGCTAACGATGAAGCACAGTTTGCCGAGCTGAAAACATTGGGTGAATTAACCGAGATTGCCTGGAAGCATGATGTGCA GGTGATGATTGAAGGGCCCGGCCATGTGCCTATGCACCTGATCCGGGAAAATATGGATTTGCAGCTCAAATATTGTCACG AGGCACCTTTTTATACCTTGGGGCCGCTCACGACCGATATTGCTCCCGGTTACGACCACATTACCTCGGCAATCGGTGCT GCCATGATTGGCTGGTATGGCACGGCCATGCTGTGTTACGTCACGCCTAAAGAGCATCTTGGTTTGCCGGACAAGGATGA TGTCAAGGATGGAATCATTACCTATAAAATCGCCGCACATGCCGCCGATCTGGCCAAAGGCCATCCTGGTGCGCAAGTTC GGGATAACGCGCTCTCCAAGGCGCGCTTCGAGTTTCGTTGGAATGATCAGTTCAATCTGAGCCTCGATCCTGACAAAGCC AGGGAATTTCACGATGAAACATTGCCGCAGGAAGGTGCCAAACTCGCCCATTTCTGCTCGATGTGCGGGCCTAATTTCTG TTCGATGAAAATTACCCAGGATGTGCGTGACTATGCTGCGCAACAGGGAATCTCCGAGACTGTAGCGTTACAGGAAGGTA TGGCCAGGAAAGCAAATGAATTCATTGAGAAGGGTGGGGAGCTTTACAGCAAACAATGA Protein sequence : MKTPVSKLEKFTNDNARVDTAAVQPLPNSRKIYIQGSRADIQVPMREITQSDTATGRGAEKNPPIYVYDTSGPYTDPDTR IDIRHGLPPLREKWIDERGDTEILTGLSSSYSLKRLQDPALTKMRFNLMRPVRHARNGANVTQMHYARRGIITPEMEFIA LRENQRRERVADLASNELLNRQHPGQSFGAIIQEWITPEFVRDEVACGRAIIPANINHPETEPMIIGRNFLVKINANIGN SALGSSIQDEVEKMTWAIRWGGDTVMDLSTGKNIHETREWIIRNSPVPIGTVPIYQALEKVDGKAEELTWEIFRDTLIEQ AEQGVDYFTIHAGVRLPFIPMTAKRMTGIVSRGGSIMAKWCLAHHQESFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIY DANDEAQFAELKTLGELTEIAWKHDVQVMIEGPGHVPMHLIRENMDLQLKYCHEAPFYTLGPLTTDIAPGYDHITSAIGA AMIGWYGTAMLCYVTPKEHLGLPDKDDVKDGIITYKIAAHAADLAKGHPGAQVRDNALSKARFEFRWNDQFNLSLDPDKA REFHDETLPQEGAKLAHFCSMCGPNFCSMKITQDVRDYAAQQGISETVALQEGMARKANEFIEKGGELYSKQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 77 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 77 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 72 |
