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Name : hsdR (NE0382) Accession : NP_840469.1 Strain : Nitrosomonas europaea ATCC 19718 Genome accession: NC_004757 Putative virulence/resistance : Unknown Product : restriction enzyme type I helicase subunits and related helicases Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : 3.1.21.3 Position : 432929 - 436078 bp Length : 3150 bp Strand : - Note : - DNA sequence : ATGATCACCGAACAAAAACTGGAAGATACAGCCGTTGGCTGGTTTGCCGAGCTGGGCTGGCCGCATGCCAACGGCCCGGA GATCGCCCCCGATGGCGACCAGCCCGCCCGCACCGACTACCGCCAAGTGGTGCTGCGAGAACACCTGCTGGCCGCACTGG CACGCATCAACCCGCACATCCCCGCCGCCGCGCTGGAGCAGGCCGCGCACGAGTTGTTGACGGTGGGCGAGCCGTTGTTG ATTGCCCGCAATCGCCGTGTGCATCGGCTGCTGCTGTCCGGTATCCCCGTAGAGTTTTCCGTGGGTGATGAAAAGCGCAG CGATCTGGTCAACCTGATCGACTTTGCCAACCCGCGCAACAACGACTTCCTGCTGGTCAGCCAGTTCACCGTCCGGGCTA CCCGCCAGCCGCGCCGCCCCGATCTGGTGGCCTTCGTCAACGGCCTGCCGCTGGTGGTGATCGAGCTGAAGAACCCGGCC AACGAGCAGACCGACATCTGGGATGCCTTGAACCAGATACAGACCTACAAGGAAGAGATTGGCGACCTGTTCAACACCAA CGTGGCGGTGGTGGTCAGCGATGGCTTCACGGCGCGGTTGGGTTCGCTCACGGCCAATCAGGAGCGCATGCAGCCCTGGC GGGCGATTGCCAACGAGGACGACCGGCCGCTGCTGGAATTCGAGCTGGAAACGCTGGTGCGTGGCTTCTTCGAGCCGGCG CTGTTTCTCGACTATGTGCGCCACTTCGTTCTGTTCGAGCAGGATGCCGATCAGATCATCAAGAAGATCGCGGGCTATCA CCAGTTCCATGCGGTGCGCGAGGCGGTGAAAGCCACGGTGATCGCCGCCAGCAACCCGAACAAAGGTTTGTTGGAAGTGC AGGAGCCGCGCGCCACCTATGGTAAGGAAGTGCAGCCCGGCAGCCGCAAGGCTGGCGTGGTGTGGCATACGCAAGGCTCG GGCAAGAGCATCACTATGGCCTGCTACGCGGGCAAGCTGTTGCAGCAGCCGGAGATGAAGAACCCCACCCTGGTGGTGGT GACCGATCGCAACGATCTGGACGGGCAGTTGTTCGCCACCTTTTGCGCCGCCGAAGACTTGCTCCGTCAAACGCCAGTGC AGGCCGGCAGCCGCGAGGAGCTGCGCGAAATACTGGCTTCGCGTGAGGCGGGCGGCATCATCTTCACCACGGTGCAGAAG TTCGCCTTGCTGGACGACGAAGAACAGCACCCGCTGCTGTCGGATCGCAGCAATATCGTGGTGATTTCCGACGAGGCGCA CCGCAGCCAGTACGGCATGAAAGGGCGACTGGATACCAAGACCGGCAAGTACGTATTTGGCTACGCCAAGCACATGCGCG ACGCGCTGGCCAACGCCACCTTCATCGGCTTCACCGGCACCCCCATCGCCCTGGAAGACAAAGACACGCGGGCGGTGTTC GGCGATTACGTCAGCATCTACGACATTCAGGACGCGGTGGACGATGGCGCCACGGTACCGATCTTCTACGAAAGCCGCCT AGCCAAGCTGGACGTGAACCAGGCCGAGATCGACGCACTCAATGCCCAGGTAGATGAGGTCATCGAGGACGAGGAAGACA TCACCGCCCGCGAGAAGACCAAGAGCGATTGGGCTGCGCTGACCAAGCTAGTCGGCGCGCAGCCGCGTCTGGAACAGGTG GCTGCCGACCTGGTGCAGCACTTCGAGACGCGCACAGCCACTCTGGAAGGCAAGGTGATGATCGTGTGCATGAGCCGGGA CATTTGCGCCGAGCTGTACAACGCCACCGTCGCCCTGCGCCCGGACTGGCACGATGCCGACCCGGAGAAGGGCGCAATCA AGGTAGTGATGACCGGCTCGGCAGCGGACAAGCCCTTGCTGCAGCCTCACCTGTACAGCCAGCAGGTCAAAAAACTCCTG GAAAAGCGCTTCAAGGACCCGGCGGACCCGTTGAAGCTGGTGATCGTGCGCGATATGTGGCTGACCGGCTTCGACGCGCC CTGCTGCCACACGATGTATGTGGACAAGCCCATGAAGGGCCACAACCTGATGCAAGCTATTGCCCGCGTCAACCGGGTAT TCCGCAACAAGCCCGGCGGGCTGGTGGTGGATTACATCGGCATCGCCAACGAGCTGAAGGCGGCGCTCAAGACCTACACC GAATCCAAGGGCAAGGGCGACCCGACGCACAACGCGGCCGAAGCTCTGGCAGTCCTGCTGGAGAAGCTGGACATCGTGCG TGGGCTGATGCACGGCTTCGACTACCGCGGGTTCGAGACCGATGCAATGAAGCTGCTGGTGCCGGTAGCCAACCATATCC TGGGGCTGAAGGACGGCAAGCAGCGCTTCCTCGATGCCATGCTGGCCGTGAGCAAGGCATTTTCCCTGTGCAGCACGTTG GATGAAACTGCTGCCTTGCGTACGGAGATTGCCTTCTTCGCCGCCGTCAAGGCCGCCATCGTCAAGTTCACCACGGTGGA CCGCAAGCGTTCCGACGCAGATAAGAACAGCGCGCTCAAGCAGATTCTGGACAACGCCATCGTCGCTGACGGGGTGGCGG ATATCTTCGCGCTGGCGGGTCTGGACAAGCCCAACATCGGGCTGTTGTCGGAAGAATTCCTGGAAGATGTGCGACAGATG AAGAACCGCAACCTGGCGGTAGAGCTTCTGGAAAAACTGCTGAGCGACGAAATCAAGGCGCGCGCACGCAACAACGTGGT GCAGGAGAAGAAGTACGGCGACCGCCTGCTGGAAACCCTGCGCAAATACCACAACCGGGCGGTGGAGACGGCGCAGATCA TCGAGGAACTGATCCAGATGGCGAAGGACTTCCAGGCGGCGCTTGAACGCGAAGCCGCGCTGGGGCTGAATCCCGATGAA ATTGCTTTCTATGATGCACTGGCCAACAACGAAAGCGCCGTGCGGGAGCTGGGAGACGACACCCTCAAGAAAATCGCCGT CGAGATTACCGAAAAACTGCGCAACAGCACCACGGTGGATTGGCAGGTGCGTGAGAGTGTTCGCGCCAAGCTGCGGATTC TGGTGCGGCGCACCTTGCAGAAATGGAAGTACCCGCCCGACAAGCAGCTGGAGGCAGTGGAATTGGTGCTACAGCAAGCG GAAGTGTTGTCGAATTCATGGTCGAAGTGA Protein sequence : MITEQKLEDTAVGWFAELGWPHANGPEIAPDGDQPARTDYRQVVLREHLLAALARINPHIPAAALEQAAHELLTVGEPLL IARNRRVHRLLLSGIPVEFSVGDEKRSDLVNLIDFANPRNNDFLLVSQFTVRATRQPRRPDLVAFVNGLPLVVIELKNPA NEQTDIWDALNQIQTYKEEIGDLFNTNVAVVVSDGFTARLGSLTANQERMQPWRAIANEDDRPLLEFELETLVRGFFEPA LFLDYVRHFVLFEQDADQIIKKIAGYHQFHAVREAVKATVIAASNPNKGLLEVQEPRATYGKEVQPGSRKAGVVWHTQGS GKSITMACYAGKLLQQPEMKNPTLVVVTDRNDLDGQLFATFCAAEDLLRQTPVQAGSREELREILASREAGGIIFTTVQK FALLDDEEQHPLLSDRSNIVVISDEAHRSQYGMKGRLDTKTGKYVFGYAKHMRDALANATFIGFTGTPIALEDKDTRAVF GDYVSIYDIQDAVDDGATVPIFYESRLAKLDVNQAEIDALNAQVDEVIEDEEDITAREKTKSDWAALTKLVGAQPRLEQV AADLVQHFETRTATLEGKVMIVCMSRDICAELYNATVALRPDWHDADPEKGAIKVVMTGSAADKPLLQPHLYSQQVKKLL EKRFKDPADPLKLVIVRDMWLTGFDAPCCHTMYVDKPMKGHNLMQAIARVNRVFRNKPGGLVVDYIGIANELKAALKTYT ESKGKGDPTHNAAEALAVLLEKLDIVRGLMHGFDYRGFETDAMKLLVPVANHILGLKDGKQRFLDAMLAVSKAFSLCSTL DETAALRTEIAFFAAVKAAIVKFTTVDRKRSDADKNSALKQILDNAIVADGVADIFALAGLDKPNIGLLSEEFLEDVRQM KNRNLAVELLEKLLSDEIKARARNNVVQEKKYGDRLLETLRKYHNRAVETAQIIEELIQMAKDFQAALEREAALGLNPDE IAFYDALANNESAVRELGDDTLKKIAVEITEKLRNSTTVDWQVRESVRAKLRILVRRTLQKWKYPPDKQLEAVELVLQQA EVLSNSWSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api52 | CAF28526.1 | hsdr-like Type I restriction enzyme | Not tested | YAPI | Protein | 0.0 | 65 |
| hsdR | BAH57699.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-VII SCCmec | Protein | 0.0 | 44 |
| hsdR | BAD24840.1 | type I restriction-modification system endonuclease homologue | Not tested | Type-V SCCmec | Protein | 0.0 | 44 |
| hsdR | YP_251977.1 | type I restriction-modification system restriction subunit | Not tested | SCCmec | Protein | 0.0 | 43 |
