Gene Information

Name : tctD (NE0344)
Accession : NP_840431.1
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Virulence
Product : response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 383765 - 384436 bp
Length : 672 bp
Strand : -
Note : -

DNA sequence : 
ATGCGTATTCTGGTTGTCGAAGATGATTCTCTGGTGGCAAGCGGCATCAAACAGGGACTGACCAACGCGGGCTATACCGT
GGATGTGGCACGAAACGCCGCAAGTGCTGAACGCCATCTCCGCGAAGAGAATTTTGATCTGGCCGTGGTAGACATCGGTC
TGCCGGATATCGATGGATTGACCCTCGTGCAACGACTGCGTCACCGGAAAATGTGCCTGCCCGTGCTGGTGCTGACGGCA
CGCGGCAGCATGGAAGACACCATTGCCGGCCTCGATATCGGTGCGGACGACTATATGACCAAACCATTCCGCCTGCCGGA
GCTGATCGCCCGTATCCGCGCCCTGATCCGCCGCGCCCATTCGATCACCAGTACCGAATTGCAGCATGACCGACTGGTTC
TCAATACCGGCAGCTATACAGCGACATTGAACGATCAGCCGCTTTTGCTGACCCGGCGCGAATGGACAATCCTCGAAACC
CTGCTGATGGCCTCTCCCCGCGTAGTCAGCAAGGACAAACTACTGCAGAACCTGACAGGCTGGGACAAGAACATTACCCC
CAATGCCATCGAAGTCCACGTATCACGTCTGCGCGCCAAGATCGCCCCGGGCGGGATCGAAATTCGCACGGTTCGCGGCA
TCGGCTATCGTATCGACCAGAGTCACTCATGA

Protein sequence : 
MRILVVEDDSLVASGIKQGLTNAGYTVDVARNAASAERHLREENFDLAVVDIGLPDIDGLTLVQRLRHRKMCLPVLVLTA
RGSMEDTIAGLDIGADDYMTKPFRLPELIARIRALIRRAHSITSTELQHDRLVLNTGSYTATLNDQPLLLTRREWTILET
LLMASPRVVSKDKLLQNLTGWDKNITPNAIEVHVSRLRAKIAPGGIEIRTVRGIGYRIDQSHS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-24 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tctD NP_840431.1 response regulator NC_002695.1.913289.p Protein 1e-23 43
tctD NP_840431.1 response regulator CP000034.1.gene2022. Protein 2e-24 43
tctD NP_840431.1 response regulator CP000647.1.gene1136. Protein 5e-25 43
tctD NP_840431.1 response regulator BAC0530 Protein 7e-25 43
tctD NP_840431.1 response regulator CP001918.1.gene2526. Protein 5e-24 42
tctD NP_840431.1 response regulator CP001138.1.gene1939. Protein 1e-24 42
tctD NP_840431.1 response regulator NC_002516.2.879194.p Protein 2e-27 42
tctD NP_840431.1 response regulator BAC0487 Protein 2e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tctD NP_840431.1 response regulator VFG0473 Protein 6e-35 44
tctD NP_840431.1 response regulator VFG0475 Protein 1e-24 42