|
Name : clpB (NE2402) Accession : NP_842397.1 Strain : Nitrosomonas europaea ATCC 19718 Genome accession: NC_004757 Putative virulence/resistance : Unknown Product : ClpB ATPase dependent protease, chaperonin Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2609855 - 2612446 bp Length : 2592 bp Strand : + Note : - DNA sequence : ATGCGGTTTGACAAATTCACCACCAAGTTTCAACAGGCACTCGCCGATGCGCAAAGCATGGCGCTGGGTCAGGATCATCC CTATATCGAACCGCAGCATCTGCTGCTCGCCCTGATGCAGCAGGATGACGGCAGCATCACTTCTCTGCTGCAGCGCGCCG GTGTGAATGCCCAACCATTGCGCCAAGCACTGACGCAAAGCCTCAAACTTCTGCCTAAAGTGGAAGGTACGGGCGGAGAA ATCAATGTTTCCCGCGATCTGGCCAATCTGCTCAATCTGACGGACAAGGAAGCGCAGAAAAGAGGAGATCAGTACATCGC CTCGGAAATGTTCCTGCTGGCAGCGCTGGAAGACAAAGGAGAAACCGGACGATTGCTGAAACAATATGGAGCGACACGTG CTGCGCTGGAACAGGCGGTCGATTCCGTGCGTGGCGGAGAAAAGGTGACCGATGCCGAAGCAGAAGGCAGTCGTGAAGCA TTGAAGAAATACACATTGGATCTGACTGAGCGTGCTCGGTCAGGCAAGCTCGATCCCGTGATCGGACGCGATGATGAAAT CCGGCGCACGATTCAGGTGCTGCAGCGGCGCACCAAAAATAACCCGGTCCTGATTGGCGAGCCCGGGGTCGGGAAAACGG CAATCGTGGAAGGATTGGCACAGCGCATCGTCAACGGGGAAGTACCTGAAACACTGAAAAACAAGCGGGTGCTGTCACTG GATATGGCAGCGCTGCTGGCAGGTGCCAAATACCGCGGAGAATTCGAGGAACGATTGAAAGCCGTGCTGAAAGAATTGGC GCAGGATGAAGGCCGCACCATCGTGTTCATCGATGAACTGCATACGATGGTGGGAGCCGGCAAGGCGGAAGGTGCCATGG ATGCGGGCAACATGCTCAAACCGGCGCTGGCACGCGGAGAACTGCACTGCGTAGGCGCAACCACACTGGATGAATATCGC AAATATGTTGAAAAGGACGCCGCACTGGAACGCCGTTTCCAGAAAGTGCTGGTGGATGAGCCCGGCGTTGAAGCAACGAT TGCCATTCTGCGCGGTCTGCAGGAGAAATATGAATTGCACCACGGCGTGGAAATCACCGATCCGGCTATCGTGGCAGCAG CCGAACTCTCCCATCGCTATATCACTGACCGCTTTCTGCCGGACAAAGCCATCGATCTGATTGACGAAGCTGCAGCACGC ATTCGCATGGAGCAGGATTCCAAACCGGAAGTCATGGATAAGCTCGACCGGCGTCTGATCCAGCTGAAAATCGAACGTGA GGCTGTCAGGAAAGAAAAGGATGATGCTTCTAAAAAACGCCTGGCATTGCTTGAAGAAGAAATCAGCAAACTGGAACGGG AATATGCTGATCTGGATGAAATACTGAAAGCAGAGAAGTCCCGTGCAAAAGGCTCACAGGAAATCAAGGAAGAACTGGAT AAACTACGCCGTGAAGAGGAAGCTGCCCGACGCAAGGGAGATCTGCAGAGAGCTTCTGAATTACTGTATGGCCGTATTCC GCAATTGGAAGCACAGCTTGCCGAACAGCTCCATCACGCCGAATCGGCCGAGGAAGCTGTACAACCAAAGTTATTCCGTA CCCAGGTAGGTGCCGAAGAAATCGCCGAAGTCGTTTCGCGTGCAACCGGCATTCCGGTTTCCAAGATGATGCAGGGTGAG CGTGAGAAATTGCTGTTCATGGAAGACAAGTTGCATGAACGTGTCATCGGCCAGGATGAAGCCGTCCGCCTGGTTTCCGA TGCAATCCGCCGCTCACGCTCCGGGCTTGCTGATCCCAATCGCCCGTATGGGTCTTTCCTGTTTCTGGGGCCGACCGGGG TGGGCAAGACCGAGCTGTGCAAAGCACTGGCAGGATTTCTGTTCGATTCCGAGGAACACCTGATCCGGGTAGATATGTCC GAATTCATGGAGAAACATTCGGTCGCACGCCTGATCGGTGCGCCACCGGGATATGTCGGCTATGAGGAGGGCGGTTATCT GACTGAACAGGTGCGGCGCAAACCCTATTCCGTCATTTTGCTCGATGAAGTGGAAAAAGCGCATCCGGATGTATTCAATG TCCTGCTGCAGGTGCTGGATGACGGACGGATGACGGATGGTCAGGGCCGTACCGTGGATTTCAAGAATACGGTTATCGTC ATGACTTCCAACCTGGGTTCACAAATGATCCAGCAAATGAGCGGAGACGATTACCAGGTCATCAAACTGGCAGTGATGGG AGAGGTTAAAACCTATTTCCGGCCTGAATTCATCAATCGTATCGACGAAGTAGTCGTTTTCCATGCACTGGGTGAAGCGC ATATCAAATCGATTGCCCGGATTCAGCTGAGCAACCTGGGCAAAAGACTGGCACAAATGGAAATGAAACTGGTAGTTTCA GAACCGGCACTGACCAAACTGGCCGAAGTCGGGTTCGATCCGGTATTCGGTGCACGGCCGCTGAAACGAGCCATTCAGGC TCAGATCGAAAATCCGTTGGCGAAAGAGCTGCTGGAAGGCCATTTTTCTGCCGGAGATACTATTCTGGTGGAATACAGTA ACGGCCACATGCAATTTACCGCACAACGTTAA Protein sequence : MRFDKFTTKFQQALADAQSMALGQDHPYIEPQHLLLALMQQDDGSITSLLQRAGVNAQPLRQALTQSLKLLPKVEGTGGE INVSRDLANLLNLTDKEAQKRGDQYIASEMFLLAALEDKGETGRLLKQYGATRAALEQAVDSVRGGEKVTDAEAEGSREA LKKYTLDLTERARSGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSL DMAALLAGAKYRGEFEERLKAVLKELAQDEGRTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR KYVEKDAALERRFQKVLVDEPGVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAAAR IRMEQDSKPEVMDKLDRRLIQLKIEREAVRKEKDDASKKRLALLEEEISKLEREYADLDEILKAEKSRAKGSQEIKEELD KLRREEEAARRKGDLQRASELLYGRIPQLEAQLAEQLHHAESAEEAVQPKLFRTQVGAEEIAEVVSRATGIPVSKMMQGE REKLLFMEDKLHERVIGQDEAVRLVSDAIRRSRSGLADPNRPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRVDMS EFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIV MTSNLGSQMIQQMSGDDYQVIKLAVMGEVKTYFRPEFINRIDEVVVFHALGEAHIKSIARIQLSNLGKRLAQMEMKLVVS EPALTKLAEVGFDPVFGARPLKRAIQAQIENPLAKELLEGHFSAGDTILVEYSNGHMQFTAQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 3e-105 | 42 |
