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Name : NE1609 (NE1609) Accession : NP_841648.1 Strain : Nitrosomonas europaea ATCC 19718 Genome accession: NC_004757 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1733884 - 1735575 bp Length : 1692 bp Strand : - Note : - DNA sequence : ATGCAGACCAACGTCGCCCTGCCGGATAAACCGGCGATCGATCCGGTTATGCTCAGCCAGGCGCGTGAACAGGCCATCGC TCGCAGCACCTCACTGATCAGAGTACTGGAAGAAACTTATCAGGGCACGCCAGATGAACTGGTGACTGTACTGGGAGAAG TGCTGCGCATGCCGGTACTGACCATGAATGATCTGTATGCATTGCATCCGGCTTTTGACAGACTGCCTTTTGCACTGGCT GCCAAACGTGAATGCATGTTGCTGCAGAAACAGGATCAATCGTATCTGCTGGCGGTGAGTGATCCTTTCCGGACGGGCCT GCGCGACTGGGTGGAGGAATATGTACCGGTGGATGCATTGTGGCATCTGGTGCATCCGGCAGATCTGGCGGCCTTTTTCG TGCAGCAGGAACAGACCATGCGTGCGATGGACAATGTGCTGTCTTCTGTTCAGGAAAATCTGATCCAGAGTGGTATCGAG GAGTTATCACTCAAAACGATTCACGAAGGGACCAGTCAGGTGGTGCGTCTGGTTCATTCGACCCTGTACGATGCGCATAA ATCGCAGGCAAGCGACATTCATCTGGAGACCACGCCGGGCGCATTGTCCATCAAATACCGGATCGACGGTGTGCTGACCA GTATAGGCACCATGCAGGAGGCGAATCTGGCCGAGCAGGTGATTTCCCGGATCAAGGTCATGTCGGATCTGGATATTGCC GAGCGCCGCATTCCGCAGGATGGCCGTTTCAAGGTTTCCATCCAGGGGCGGGAAATCGATTTCCGCGTATCGGTCATGCC GAGCATTTTTGGGGAAGATGCCGTGTTGCGGATCCTGGATCGTCAGGCGCTGACCGATCATGTCGAAGGATTGACACTGA ACCAATTGGGATTCAACGCAACTTCCATTGCCAGCGTACGCCGGCTCAGCGCGGAGCCGTATGGCATGCTGCTGGTGACC GGGCCGACCGGCAGCGGCAAGACGACTTCGCTGTATGCCGCCATTTCGGAAGTCAATCACGGCCATGACAAAATCATTAC GATCGAGGATCCAATCGAATATCAGTTGCCTGGTGTATTGCAGATACCGGTCAACGAGAAAAAGGGGCTGACTTTCGCCC GCGGATTGCGTTCGATTCTGCGGCACGATCCTGACAAAATCATGGTGGGTGAAATTCGCGATGCCGAAACGGCACAGATT GCAATTCAGGCTGCACTCACGGGGCATCTGGTCTTTACCACGGTTCATGCCAACAACGTGTTTGACGTGATTGGCCGGTT TGCACACATGGGTGTTGACCCTTACAGTTTTGTTTCGGCACTGAATGGCATCGTGGCGCAGCGGCTGGTGCGCCTGCTGT GCCCGAATTGCATGGTTGCAGAACAGCCGGATCAGCAGATGATCGCAGATTCGGGGATTACCCCGGAACAGGCAGAGCAG TTCGATTTTCGCTCTGCCAAAGGGTGCGGCCATTGCCGGGGTAGCGGTTATCGCGGGCGCAGCGCAATTGCTGAGATTTT GCTGCTGAATGATGAAATCCGTGAGCTGATCATTGCGCAGGCACCAATTCGTCGCATCAAGGAGGCAGCCCGGCTCAACG GCACCCGTTTCTTGCGTGAAGCGGCGCTGGATATGGTTAAAACCGGACAGACCAGCTTACAGGAGGCCAATCGTGTCACT GTCGTGGCGTAA Protein sequence : MQTNVALPDKPAIDPVMLSQAREQAIARSTSLIRVLEETYQGTPDELVTVLGEVLRMPVLTMNDLYALHPAFDRLPFALA AKRECMLLQKQDQSYLLAVSDPFRTGLRDWVEEYVPVDALWHLVHPADLAAFFVQQEQTMRAMDNVLSSVQENLIQSGIE ELSLKTIHEGTSQVVRLVHSTLYDAHKSQASDIHLETTPGALSIKYRIDGVLTSIGTMQEANLAEQVISRIKVMSDLDIA ERRIPQDGRFKVSIQGREIDFRVSVMPSIFGEDAVLRILDRQALTDHVEGLTLNQLGFNATSIASVRRLSAEPYGMLLVT GPTGSGKTTSLYAAISEVNHGHDKIITIEDPIEYQLPGVLQIPVNEKKGLTFARGLRSILRHDPDKIMVGEIRDAETAQI AIQAALTGHLVFTTVHANNVFDVIGRFAHMGVDPYSFVSALNGIVAQRLVRLLCPNCMVAEQPDQQMIADSGITPEQAEQ FDFRSAKGCGHCRGSGYRGRSAIAEILLLNDEIRELIIAQAPIRRIKEAARLNGTRFLREAALDMVKTGQTSLQEANRVT VVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-78 | 44 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-78 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NE1609 | NP_841648.1 | type II secretion system protein E | VFG1876 | Protein | 2e-79 | 47 |
| NE1609 | NP_841648.1 | type II secretion system protein E | VFG0182 | Protein | 2e-80 | 46 |
| NE1609 | NP_841648.1 | type II secretion system protein E | VFG0233 | Protein | 1e-71 | 44 |
