Gene Information

Name : xerD (NE1458)
Accession : NP_841499.1
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Unknown
Product : phage integrase domain/SAM domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1593227 - 1594183 bp
Length : 957 bp
Strand : -
Note : -

DNA sequence : 
GTGCGCCAGAGCCCTGATTTTTTCAGAGATATGCTCCGCATGAACATAACCGACACCAATATCCGGATGCTGGATGAGTT
TACGGATGCCTTATGGTTGGAGGATGGTCTGTCCCGTAATACATTGGCCAGCTATCGGGCAGATCTGATGCAACTGGTTG
AATGGCTCGGCCGGCAGCCAAGGACAAACGGATCATTGAGTGACGTAACACAAGCTGATTTGCTGGCTTTTCTGTCCGAC
AGGATCGGACAGGGGGTGAAAGCAAGTACTACTTGCAGGGCGCTCACCTGTATCAAACGGTTTTACCGGTATCTGTTACG
CCAGGGGAAAATCCTGGCGGATCCTGCCACGAATATAGATAGTCCGAAAATCTCCCGCCATTTACCTGTAAGCCTGACTG
AGACGGAGGTGGAAGCACTGCTGGCAGCACCGGACACCCGGCAGCCACTTGGTTTACGTGACCGTGCCATGCTGGAAATA
CTTTATGCTGCAGGGTTGCGTGTTTCAGAGCTGGTTGGATTAAGCATTTCCCAAATTCGCCAGGATATGGGAGTGGTGCG
TATCTTAGGTAAGGGCAGCAAGGAGCGTCTGATTCCTCTGGGTGAGGAAGCATTGCACTGGCTGAGCTTGTATCTTCAGG
AAGCGCGCCCGGTACTGCTGGCGGGCAAACATAGCAATATGTCATTCGTGACCACACGTGGTGATGCCATGACCCGCCAG
GCATTCTGGTATCTGATCAAGCGCCATGCACGACAGGCAGGAATCGTAAAGCTGTTGTCTCCCCATACACTTCGCCATGC
CTTTGCTACTCATTTACTCAATCATGGTGCTGATTTGCGAGTGGTGCAACTGTTGCTTGGCCATAGTGATATTTCAACTA
CGCAAATTTATACTCATGTTGCACGCGAGCGGCTGAAGCAGTTGCATGCCCGGCATCATCCAAGGGGGACGCTGTAA

Protein sequence : 
MRQSPDFFRDMLRMNITDTNIRMLDEFTDALWLEDGLSRNTLASYRADLMQLVEWLGRQPRTNGSLSDVTQADLLAFLSD
RIGQGVKASTTCRALTCIKRFYRYLLRQGKILADPATNIDSPKISRHLPVSLTETEVEALLAAPDTRQPLGLRDRAMLEI
LYAAGLRVSELVGLSISQIRQDMGVVRILGKGSKERLIPLGEEALHWLSLYLQEARPVLLAGKHSNMSFVTTRGDAMTRQ
AFWYLIKRHARQAGIVKLLSPHTLRHAFATHLLNHGADLRVVQLLLGHSDISTTQIYTHVARERLKQLHARHHPRGTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-60 51
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-60 51