Gene Information

Name : NE1404 (NE1404)
Accession : NP_841445.1
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1532476 - 1533150 bp
Length : 675 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCTTACACCCGTTCTGGAATTGAGCAATGTCAGCAAAACCTATTCGAGCCGGCAGGTGCTGTCCGGTTTGTCGTA
CAGCTTTGCAGCCGGGGAATATGTCGCAATCATGGGAGATTCCGGAGTAGGCAAATCGACCCTGCTGAACCTGATCGCCG
GACTGGACAGCCCCGACAGCGGCGAGATCAGAATTGACGGCAAAATCCTGCCGGTGGAAGACGAAGCAGCAACGAACCTG
CGACGCAGGCACTTGGGATTCATCTTTCAGGCATTTCACATCCTGCCGCACCTGACGCTGCTGCAAAATGTCTCGCTGCC
GCTGTTGCTCAATCGTCTGCCCCTCGATCGTGCACCCGTCATGCTGACGGCAGTGGGTTTACAGGGAAGGGAACAGGATT
TTCCCCATCAGCTGTCCGGAGGAGAACTGCAGCGGGTAGCCATTGCCCGTGCGCTGGTACACCGCCCTCGTCTGATTCTG
GCTGATGAACCTACCGGCAATCTCGATCAGGATACCGCCCATGAGGTACTGCAACTGATCCGTACCGAAATCAAAGCCAA
TCAGGCTTCCGCGATTATCGTCACGCACTCGCGCCTGGCCGCCGAGACAGCCGATAAAATCCTGATGCTGAGCAAACACG
GTCTTACACCCGTCCCACTGGAAAATCAGACATGA

Protein sequence :
MSLTPVLELSNVSKTYSSRQVLSGLSYSFAAGEYVAIMGDSGVGKSTLLNLIAGLDSPDSGEIRIDGKILPVEDEAATNL
RRRHLGFIFQAFHILPHLTLLQNVSLPLLLNRLPLDRAPVMLTAVGLQGREQDFPHQLSGGELQRVAIARALVHRPRLIL
ADEPTGNLDQDTAHEVLQLIRTEIKANQASAIIVTHSRLAAETADKILMLSKHGLTPVPLENQT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-27 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-27 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NE1404 NP_841445.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-37 47
NE1404 NP_841445.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-26 41