Gene Information

Name : lolD (NE1056)
Accession : NP_841125.1
Strain : Nitrosomonas europaea ATCC 19718
Genome accession: NC_004757
Putative virulence/resistance : Resistance
Product : lolD; lipoprotein releasing system ATP-binding ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1144671 - 1145345 bp
Length : 675 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTAAAATCATCATTGCCTGTCGGGATCTGTATAAGAGTTATTTCCAGGGTAATCTCGAAGTTCCGGTGCTGCACGG
TATCGATCTGCAAGTGAATGAAGGTGAAATGGTCGCGATTGTCGGTGCTTCCGGTTCGGGCAAGAGTACATTGCTGCATG
TGCTGGGGGGACTGGATAAGCCGACGCGCGGGGAAGTTACGCTGCTGGACAGGGAGTTGTCCACCATTAGTGAAGCGGAG
CGTGGCTCATTGCGCAATCATGCATTGGGTTTCGTCTACCAGTTTCATCATTTGTTGCCTGAATTCAGTGCCCAGGAAAA
TGTTGCTATGCCGCTGTTCATTCGCCGTATGAATAAAAAAGCCGCAATGGAACAGGCAGCTGCCATGCTGCAACGGGTGG
GCCTGGGGCACCGGCTTACGCATACTCCCGGTGAATTATCCGGAGGTGAACGTCAGCGGGCTGCGGTTGCGCGCGCACTG
GTGACCCGGCCAGCCTGTGTACTAGCCGACGAGCCGACCGGTAATCTCGACCGGCATACTGCCGAAGCGGTATTCGATCT
CATGCTGGAACTCAATCACGAGGCCAATGCGGGGCTGGTAATCGTTACCCACGATACTCAACTGGCCAGCCGTGCAGATC
GGGTATTACATTTGGTGGATGGTATGCTTCAGTAG

Protein sequence : 
MSKIIIACRDLYKSYFQGNLEVPVLHGIDLQVNEGEMVAIVGASGSGKSTLLHVLGGLDKPTRGEVTLLDRELSTISEAE
RGSLRNHALGFVYQFHHLLPEFSAQENVAMPLFIRRMNKKAAMEQAAAMLQRVGLGHRLTHTPGELSGGERQRAAVARAL
VTRPACVLADEPTGNLDRHTAEAVFDLMLELNHEANAGLVIVTHDTQLASRADRVLHLVDGMLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-28 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lolD NP_841125.1 lolD; lipoprotein releasing system ATP-binding ABC transporter NC_008702.1.4606598. Protein 9e-35 45
lolD NP_841125.1 lolD; lipoprotein releasing system ATP-binding ABC transporter NC_012469.1.7686878. Protein 6e-39 43
lolD NP_841125.1 lolD; lipoprotein releasing system ATP-binding ABC transporter CP001581.1.gene598.p Protein 1e-33 41