Gene Information

Name : hpaD (S4652)
Accession : NP_839764.1
Strain : Shigella flexneri 2457T
Genome accession: NC_004741
Putative virulence/resistance : Unknown
Product : homoprotocatechuate dyoxygenase
Function : -
COG functional category : S : Function unknown
COG ID : COG3384
EC number : -
Position : 4545656 - 4546507 bp
Length : 852 bp
Strand : -
Note : residues 1 to 283 of 283 are 99.64 pct identical to residues 1 to 283 of 283 from GenPept : >emb|CAA86042.1| (Z37980) homoprotocatechuate dyoxygenase [Escherichia coli]

DNA sequence :
ATGGGTAAGTTAGCGTTAGCCGCCAAGATCACGCACGTACCGTCGATGTATCTCTCTGAACTACCAGGAAAAAACCACGG
TTGTCGCCAGGGTGCGATCGACGGGCATAAAGAGATCAGCAAGCGTTGCCGGGAAATGGGCGTCGATACCATTATCGTTT
TCGATACTCACTGGCTGGTCAACAGTGCTTATCACATCAACTGTGCAGACCATTTTGAAGGCGTCTACACCAGCAACGAG
CTGCCGCATTTTATTCGCGACATGACCTACAACTACGAGGGCAACCCGGAGTTGGGGCAGCTAATTGCCGAGGAAGCCTT
AAAGCTCGGCGTGCGGGCAAAAGCGCACAATATTCCCAGCCTGAAACTGGAATACGGCACGCTGGTACCGATGCGCTACA
TGAATGAAGACAAGCACTTCAAAGTGGTCTCCATTTCGGCTTTCTGCACGGTTCACGATTTTGCCGACAGCCGCAAGCTG
GGCGAAGCGATTCTGAAAGCGATCGAACAGTACGACGGCACCGTGGCGGTCCTTGCCAGCGGTTCGTTATCGCACCGCTT
TATTGACGATCAGCGTGCGGAAGAAGGGATGAACAGCTACACCCGCGAGTTCGACCGCCAGATGGACGAGCGTGTGGTGA
AGCTGTGGCGCGAAGGCCAGTTCAAAGAGTTTTGCAATATGCTGCCGGAGTACGCCGACTACTGCTACGGCGAAGGCAAT
ATGCACGACACGGTGATGCTGCTGGGGATGCTAGGCTGGGATAAATACGACGGCAAGGTGGAGTTTATTACCGAGCTGTT
CCCAAGCTCTGGCACCGGTCAGGTTAACGCTGTTTTCCCGCTGCCCGCGTAA

Protein sequence :
MGKLALAAKITHVPSMYLSELPGKNHGCRQGAIDGHKEISKRCREMGVDTIIVFDTHWLVNSAYHINCADHFEGVYTSNE
LPHFIRDMTYNYEGNPELGQLIAEEALKLGVRAKAHNIPSLKLEYGTLVPMRYMNEDKHFKVVSISAFCTVHDFADSRKL
GEAILKAIEQYDGTVAVLASGSLSHRFIDDQRAEEGMNSYTREFDRQMDERVVKLWREGQFKEFCNMLPEYADYCYGEGN
MHDTVMLLGMLGWDKYDGKVEFITELFPSSGTGQVNAVFPLPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaD AAO17180.1 HpaD Not tested tcd island Protein 4e-126 90