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Name : hpaF (S4651) Accession : NP_839763.1 Strain : Shigella flexneri 2457T Genome accession: NC_004741 Putative virulence/resistance : Unknown Product : 5-carboxymethyl-2-hydroxymuconate delta-isomerase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3232 EC number : - Position : 4545266 - 4545646 bp Length : 381 bp Strand : - Note : residues 1 to 126 of 126 are 88.09 pct identical to residues 1 to 126 of 126 from GenPept : >emb|CAD08230.1| (AL627269) 5-carboxymethyl-2-hydroxymuconate delta-isomerase [Salmonella enterica subsp. enterica serovar Typhi] DNA sequence : ATGCCGCACTTTATCGTGGAATGTACTGAAAATATTCGTGAAGAAGCCCGCTTACCTGAGCTGTTTGCCAGTGTTAACAC TGCACTGGCGGCAACGGGGATTTTTCCGCTTGGGGGAATACGTAGCCGGGCGCACTGGATCGATACCTGGCAAATGGCTG ATGGCAAGCACGATTACGCCTTTGTGCATATGACGCTAAAAATCGGCAGCGGACGCAGTCTGGAAAGCCGTCAGGAAGTG GGCGAAATGCTGTTTGATCTGATTAAAACGCACTTCGCCTCACTGATGGAGAGCCGTTACCTAGCGCTTTCATTTGAGAT TGCAGAGCTGCACCCGACGTTGAATTTCAAACAGAACAACGTACACGCGTTGTTTAAATAA Protein sequence : MPHFIVECTENIREEARLPELFASVNTALAATGIFPLGGIRSRAHWIDTWQMADGKHDYAFVHMTLKIGSGRSLESRQEV GEMLFDLIKTHFASLMESRYLALSFEIAELHPTLNFKQNNVHALFK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hpaF | AAO17181.1 | HpaF | Not tested | tcd island | Protein | 2e-47 | 81 |
