|
Name : S4440 (S4440) Accession : NP_839580.1 Strain : Shigella flexneri 2457T Genome accession: NC_004741 Putative virulence/resistance : Unknown Product : ISSfl3 orfD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3436 EC number : - Position : 4350527 - 4351489 bp Length : 963 bp Strand : + Note : residues 1 to 320 of 320 are 99.68 pct identical to residues 214 to 533 of 533 from GenPept : >gb|AAL72472.1| (AF386526) hypothetical protein [Shigella flexneri 2a] DNA sequence : ATGGAACATATCCCTTTATATCGCCAGTCAGAAATATACGCGCGACAGGGCGTGGAGCTGAGCCGTAATACCATGGTGCG CTGGGTATCAGAAATGGCAGACAAACTCCGTCCTCTGTATATAGCGCTGAATGACTATGTTCTGGAGGCAGGAAAGGTGC ACGCAGATGACACTCCGGTGAAAGTACTGGCCCCGGGGAACGGAAAGACGAAAACGGGTCGTCTGTGGGTATACGTCAGG GATGATCGTAATGCGGGTTCATCCCTGCCGGCAGCCGTCTGGTTCGCGTATTCGGCAGATCGCAAAGGAGAACATCCGCA GCTCCACCTGGCAAAGTATCAGGGCGTACTGCAGGCTGATGCCTATGCAGGTTATAACGTACTGTACGAAACGGGCCGGG TGAAGGAAGCCGGGTGCCTGGCCCACGCCCGCCGAAAAATCCATGACGAGGATGTGCGCCGTCCGACAGAAATGACTCAG GAAGCGCTCAGACGGATAGCAGAGTTATACGACATAGAAGCGGAGATACGTGGCAGTCCGGCAGAGGAACGGCTTGCAGT CAGAAAAGCCAGAAGCGTCCAGTTGATGCAGTCGTTGTACGACTGGATACAGTTGCAGAGGAAAACGCTGTCGAAACATG CGGAGATGGCGAAGGCGTTCGACTATATCCTGAATCACTGGAATGCGCTGAACGAGTTCTGTCGTGACGGCTGGGTGGAA ATAGACAACAACATCGGTGAAAACGCGTTACGATCGGTGGCGGTTGGAAGAAAAAATTATCTCTTTTTCGGCTCAGACAA GGGAGGAGAAAGTGCGGCGATCATCTACAGTCTGCTGGTCACCTGCAAACAGAACGAAGTGGAGCCGGAGGACTGGTTGC GCGAAGTGATCGAGAAGCTCAATGACTGGCCGTCGAACCAAGTGCATAAACTGCTGCCCTGGAACTTCTCGTCTGTAAAA TAA Protein sequence : MEHIPLYRQSEIYARQGVELSRNTMVRWVSEMADKLRPLYIALNDYVLEAGKVHADDTPVKVLAPGNGKTKTGRLWVYVR DDRNAGSSLPAAVWFAYSADRKGEHPQLHLAKYQGVLQADAYAGYNVLYETGRVKEAGCLAHARRKIHDEDVRRPTEMTQ EALRRIAELYDIEAEIRGSPAEERLAVRKARSVQLMQSLYDWIQLQRKTLSKHAEMAKAFDYILNHWNALNEFCRDGWVE IDNNIGENALRSVAVGRKNYLFFGSDKGGESAAIIYSLLVTCKQNEVEPEDWLREVIEKLNDWPSNQVHKLLPWNFSSVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK00463.1 | unknown | Not tested | SHI-1 | Protein | 2e-98 | 66 |
| SF2972 | NP_708746.1 | hypothetical protein | Not tested | SHI-1 | Protein | 7e-96 | 66 |
| c3563 | NP_755438.1 | hypothetical protein | Not tested | PAI I CFT073 | Protein | 1e-95 | 65 |
| unnamed | AAL67373.1 | unknown | Not tested | PAI II CFT073 | Protein | 8e-55 | 57 |
| unnamed | AAL67335.1 | L0015-like protein | Not tested | PAI II CFT073 | Protein | 1e-56 | 56 |
| Z4314 | NP_289540.2 | hypothetical protein | Not tested | OI-122 | Protein | 4e-56 | 51 |
| RS12 | AAP82957.1 | transposase | Not tested | PAPI-2 | Protein | 4e-47 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| S4440 | NP_839580.1 | ISSfl3 orfD | VFG0634 | Protein | 3e-96 | 66 |
| S4440 | NP_839580.1 | ISSfl3 orfD | VFG1700 | Protein | 4e-96 | 65 |
