Gene Information

Name : shiE (S4829)
Accession : NP_839225.1
Strain : Shigella flexneri 2457T
Genome accession: NC_004741
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3955687 - 3956658 bp
Length : 972 bp
Strand : -
Note : residues 1 to 323 of 323 are 99.68 pct identical to residues 1 to 323 of 323 from NRprotein_Feb03 : >ref|NP_709452.1| orf, partial conserved hypothetical protein [Shigella flexneri 2a str. 301] gb|AAN45159.1|AE015379_1 orf, partial conserved hypothetical

DNA sequence :
TTGCCATGTTTTACGGCAATGAGAGCAGAGATAGCGCTGATGTCCGGCAGTGCTTTTGCCGTTACGCACCACGCCTTCAG
TAGCGGAGCAGGAAGGACATCTGATGGAAATGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAA
GTTGGCAGCATTACCCCTGGAGTGAAACAAAGGCAGCTTATCGTTGTTTTTCAAACGATAAAGTCTCTGCTAATAAAATC
ATGACTCCTCACAAAGAAAATATCACTGAAAGAGCTCAGCAGTTTAAAAGAGTTTTAGTTTTACAGGATACAACAGAACT
TAATTATTCTGGTCAGAAAGAAAAACAAGGAGTTGGTCCCAAAAAACATAAAGATGAAAGAAACTTATTTCTTCATCCTC
AACTCGTCATCAGTGAGTCAGGTGTTTGCCTCGGTGTTTATGATGACTATCAGTGGTTCAGGGATGAATTAAAAACCAGT
AAAAATACCCGACAAGAAATCTGCAATGATTTACTTCATAAAAAACATGTCAGTGAAAAAGAAACCTGGCGTTGGGTTGA
AGGATATAATAAAGCAACAGAACTGGCTCGCCAATGCCCTGATACCCATGTATTGTCAATTTCTGATCGTGAAGGCGATT
TTTATGACCTGTTTGAACGCGCAGCGCAGACTCCCGGAATAAAAGCTGACTGGCTTGTCAGAATGAAATTTAATAACAGA
GCAACGCTGAATATTAATGGTAAACGGGATCATAGGTTGTTGCACGAAAGAATCATGGAGATTACACCGCAGCAACTGGT
TGAATTCACTATACCTGATGGGCGGGGGCAGCAAGCCAGAACACTGCCTGACATGCTTTCATCAGACGCAGGTCCTCTCT
CATATCCTCTGATTTACTCCAGTAAGGTGATGATCATATCTTTATTTGATAGTACGGTAATGCCAGATAAATACAGACAC
AATGGTAAATAA

Protein sequence :
MPCFTAMRAEIALMSGSAFAVTHHAFSSGAGRTSDGNGSHASTLKSPSYTKSVSWQHYPWSETKAAYRCFSNDKVSANKI
MTPHKENITERAQQFKRVLVLQDTTELNYSGQKEKQGVGPKKHKDERNLFLHPQLVISESGVCLGVYDDYQWFRDELKTS
KNTRQEICNDLLHKKHVSEKETWRWVEGYNKATELARQCPDTHVLSISDREGDFYDLFERAAQTPGIKADWLVRMKFNNR
ATLNINGKRDHRLLHERIMEITPQQLVEFTIPDGRGQQARTLPDMLSSDAGPLSYPLIYSSKVMIISLFDSTVMPDKYRH
NGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
shiE NP_839225.1 hypothetical protein Virulence SHI-2 Protein 3e-153 100
shiE NP_709452.1 hypothetical protein Virulence SHI-2 Protein 2e-152 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
shiE NP_839225.1 hypothetical protein VFG0613 Protein 7e-153 99