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Name : iucD (S4053) Accession : NP_839220.1 Strain : Shigella flexneri 2457T Genome accession: NC_004741 Putative virulence/resistance : Virulence Product : lysine:N6-hydroxylase Function : - COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism COG ID : COG3486 EC number : - Position : 3948660 - 3949997 bp Length : 1338 bp Strand : - Note : residues 1 to 445 of 445 are 100.00 pct identical to residues 1 to 445 of 445 from GenPept : >gb|AAD44749.1|AF141323_20 (AF141323) IucD [Shigella flexneri] DNA sequence : ATGAAAAAAAGTGTCGATTTTATTGGTGTCGGGACAGGGCCATTTAATCTCAGCATTGCTGCATTGTCACATCAGATCGA AGAACTGAACTGTCTCTTCTTTGACGAACATCCTCATTTTTCCTGGCATCCGGGTATGCTGGTACCGGATTGTCATATGC AGACCGTCTTTCTGAAAGATCTGGTCAGTGCAGTTGCACCTACAAATCCCTACAGCTTTGTTAACTATCTGGTGAAGCAC AAAAAGTTCTATCGCTTCCTTACAAGCAGGCTACGTACAGTATCCCGTGAAGAGTTTTCTGACTATCTCCGCTGGGCTGC TGAAGATATGAATAACCTGTATTTCAGTCATACCGTTGAAAATATTGATTTCGACAAAAAAAGTCGATTGTTTCTGGTTC AGACCAGTCGGGGAGAATATTTTGCCCACAATATCTGCCTTGGTACAGGAAAACAACCTTATTTACCACCCTGTGTGAAG CATGTGACACAATCCTGTTTCCATGCCAGTGAAATGAATCTTCGTCGGCCGGACCTGAGTGGAAAACGGATAACCGTGGT TGGTGGAGGACAGAGTGGTGCAGACCTGTTCCTTAATGCATTACGCGGGGAATGGGGAGAAGCGGCGGAAATAAACTGGG TCTCACGGCGTAATAATTTTAACGCACTGGATGAGGCTGCTTTTGCTGATGAGTATTTTACACCTGAATATATTTCAGGC TTCTCCGGACTGAAGGAAGATATTCGCCATCAGTTACTGGATGAGCAGAAAATGACATCGGATGGCATCACTGCCGATTC TTTACTGACCATTTATCGTGAGTTGTACCACCGTTTTGAAGTTCTGAGAAAACCAAGAAATATCCGTCTGCTACCCAGTC GCTCGGTAACAACTCTGGAAAGTAGTGGTCCGGGCTGGAGGTTATTGATGGAACATCATCTGGATCAGGGCAGAGAGAGC CTGGAAAGTGATGTGGTGATTTTCGCCACAGGTTACCGTTCTGCATTGCCACAAATACTTCCCTCACTGATGCCCTTGAT CACCATGCACGATAAGAACACCTTTAAAGTGCGTGATGACTTCACTCTGGAATGGAGTGGCCCGAAAGAAAATAACATCT TTGCGGTCAACGCCAGCATGCAAACTCATGGCATCGCCGAACCCCAGCTCAGCCTGATGGCCTGGCGATCTGCACGTATT CTTAATCGCGTACTGGGGCGTGATTTATTCGATCTCAGTATGCCGCCCGCACTGATTCAGTGGCGCAGCGGCAGCCGGAA AAAACCACAGCCGGAGGCTGCTTCTTTAACTCACTATACAGCAAATATTCAGGAATAA Protein sequence : MKKSVDFIGVGTGPFNLSIAALSHQIEELNCLFFDEHPHFSWHPGMLVPDCHMQTVFLKDLVSAVAPTNPYSFVNYLVKH KKFYRFLTSRLRTVSREEFSDYLRWAAEDMNNLYFSHTVENIDFDKKSRLFLVQTSRGEYFAHNICLGTGKQPYLPPCVK HVTQSCFHASEMNLRRPDLSGKRITVVGGGQSGADLFLNALRGEWGEAAEINWVSRRNNFNALDEAAFADEYFTPEYISG FSGLKEDIRHQLLDEQKMTSDGITADSLLTIYRELYHRFEVLRKPRNIRLLPSRSVTTLESSGPGWRLLMEHHLDQGRES LESDVVIFATGYRSALPQILPSLMPLITMHDKNTFKVRDDFTLEWSGPKENNIFAVNASMQTHGIAEPQLSLMAWRSARI LNRVLGRDLFDLSMPPALIQWRSGSRKKPQPEAASLTHYTANIQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iucD | AAD44749.1 | IucD | Virulence | SHI-2 | Protein | 0.0 | 100 |
| iucD | NP_839220.1 | lysine:N6-hydroxylase | Virulence | SHI-2 | Protein | 0.0 | 100 |
| iucD | NP_709457.1 | lysine:N6-hydroxylase | Virulence | SHI-2 | Protein | 0.0 | 100 |
| iucD | AAK71634.1 | IucD | Virulence | SHI-3 | Protein | 0.0 | 99 |
| iucD | YP_002414043.1 | L-lysine 6-monooxygenase | Virulence | Not named | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| iucD | NP_839220.1 | lysine:N6-hydroxylase | VFG0618 | Protein | 0.0 | 100 |
| iucD | NP_839220.1 | lysine:N6-hydroxylase | VFG0937 | Protein | 0.0 | 99 |
| iucD | NP_839220.1 | lysine:N6-hydroxylase | VFG1084 | Protein | 0.0 | 99 |
