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Name : soxS (S3589) Accession : NP_838823.1 Strain : Shigella flexneri 2457T Genome accession: NC_004741 Putative virulence/resistance : Resistance Product : DNA-binding transcriptional regulator SoxS Function : - COG functional category : K : Transcription COG ID : COG2207 EC number : - Position : 3459676 - 3459999 bp Length : 324 bp Strand : - Note : regulates genes involved in response to oxidative stress DNA sequence : ATGTCCCATCAGAAAATTATTCAGGATCTTATCGCATGGATTGACGTGCATATTGACCAGCCGCTTAACATTGATGTCGT CGCAAAAAAATCAGGCTATTCAAAGTGGTACTTGCAACGGATGTTCCGCACGGTGACGCATCAGACGCTTGGCGATTACA TTCGCCAACGCCGCCTGTTACTGGCCGCCGTTGAGTTGCGCACCACCGAGCGTCCGATTTTTGATATCGCAATGGACCTG GGTTATGTCTCGCAGCAGACCTTCTCCCGCGTTTTCCGTCGGCAGTTTGATCGCACTCCCAGCGATTATCGCCACCGCCT GTAG Protein sequence : MSHQKIIQDLIAWIDVHIDQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAMDL GYVSQQTFSRVFRRQFDRTPSDYRHRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| soxS | YP_219131.1 | DNA-binding transcriptional regulator SoxS | Not tested | SPI-4 | Protein | 9e-45 | 95 |
| tetD | AAL08447.1 | putative transcriptional regulator TetD | Not tested | SRL | Protein | 2e-21 | 51 |
| tetD | AEA34665.1 | tetracycline resistance protein D | Not tested | Not named | Protein | 2e-21 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| soxS | NP_838823.1 | DNA-binding transcriptional regulator SoxS | CP000034.1.gene4505. | Protein | 3e-46 | 99 |
| soxS | NP_838823.1 | DNA-binding transcriptional regulator SoxS | BAC0371 | Protein | 2e-46 | 99 |
| soxS | NP_838823.1 | DNA-binding transcriptional regulator SoxS | NC_002695.1.914293.p | Protein | 2e-46 | 99 |
| soxS | NP_838823.1 | DNA-binding transcriptional regulator SoxS | CP001138.1.gene4488. | Protein | 3e-45 | 95 |
| soxS | NP_838823.1 | DNA-binding transcriptional regulator SoxS | CP001918.1.gene327.p | Protein | 2e-43 | 89 |
| soxS | NP_838823.1 | DNA-binding transcriptional regulator SoxS | CP000647.1.gene4499. | Protein | 8e-43 | 88 |
| soxS | NP_838823.1 | DNA-binding transcriptional regulator SoxS | NC_010558.1.6276025. | Protein | 9e-22 | 51 |
| soxS | NP_838823.1 | DNA-binding transcriptional regulator SoxS | CP001138.1.gene612.p | Protein | 2e-23 | 46 |
| soxS | NP_838823.1 | DNA-binding transcriptional regulator SoxS | CP000647.1.gene1624. | Protein | 3e-19 | 43 |
| soxS | NP_838823.1 | DNA-binding transcriptional regulator SoxS | CP001918.1.gene2033. | Protein | 3e-19 | 43 |
| soxS | NP_838823.1 | DNA-binding transcriptional regulator SoxS | CP001138.1.gene1637. | Protein | 5e-19 | 42 |
| soxS | NP_838823.1 | DNA-binding transcriptional regulator SoxS | BAC0560 | Protein | 5e-19 | 42 |
| soxS | NP_838823.1 | DNA-binding transcriptional regulator SoxS | NC_002695.1.917339.p | Protein | 5e-19 | 42 |
| soxS | NP_838823.1 | DNA-binding transcriptional regulator SoxS | CP000034.1.gene1596. | Protein | 4e-19 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| soxS | NP_838823.1 | DNA-binding transcriptional regulator SoxS | VFG0585 | Protein | 3e-45 | 95 |
| soxS | NP_838823.1 | DNA-binding transcriptional regulator SoxS | VFG1038 | Protein | 8e-22 | 51 |
