Gene Information

Name : S3197 (S3197)
Accession : NP_838481.1
Strain : Shigella flexneri 2457T
Genome accession: NC_004741
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3084138 - 3084593 bp
Length : 456 bp
Strand : +
Note : residues 9 to 151 of 151 are 99.30 pct identical to residues 1 to 143 of 143 from GenPept : >gb|AAK00476.1| (AF200692) unknown [Shigella flexneri 2a]

DNA sequence :
ATGATTCACCTGTTCAAAACCTGCATGATTACCGCCTTCATTCTGGGGTTAACGTGGTCTGCCCCACTCCGGGCACAGGA
TCAACGTTACATCAGTATACGCAATACAGATACGATATGGCTCCCGGGAAATATTTGTGCTTACCAGTTCCGGCTGGATA
ATGGCGGAAACGGTGAAGGATTTGGCCCCCTCACCATCACTCTGCAACTCAAAGACAAATATGGTCAGACGCTGGTGACC
AGAAAAATGGAAACGGAAGCTTTTGGTGACAGTAATGCCACGCGAACCACAGACGCATTTCTGGAAACGGAGTGCGTGGA
AAATGTCGCCACAACCGAAATCATTAAAGCAACTGAAGAAAGTAACGGCCATCGTGTCAGTCTGCCGTTATCGGTTTTCG
ATCCCCAGGACTACCATCCACTGCTGATTACCGTTTCCGGAAAAAATGTTAACTGA

Protein sequence :
MIHLFKTCMITAFILGLTWSAPLRAQDQRYISIRNTDTIWLPGNICAYQFRLDNGGNGEGFGPLTITLQLKDKYGQTLVT
RKMETEAFGDSNATRTTDAFLETECVENVATTEIIKATEESNGHRVSLPLSVFDPQDYHPLLITVSGKNVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S3197 NP_838481.1 hypothetical protein Not tested SHI-1 Protein 2e-67 100
SF2993 NP_708767.1 hypothetical protein Not tested SHI-1 Protein 2e-67 100
unnamed AAK00476.1 unknown Not tested SHI-1 Protein 1e-62 99
unnamed AAW51752.1 Aec69 Not tested AGI-3 Protein 4e-67 99
unnamed ADD91706.1 hypothetical conserved protein Not tested PAI-I AL862 Protein 4e-67 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S3197 NP_838481.1 hypothetical protein VFG0657 Protein 4e-68 100