Gene Information

Name : S3187 (S3187)
Accession : NP_838470.1
Strain : Shigella flexneri 2457T
Genome accession: NC_004741
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3069140 - 3069739 bp
Length : 600 bp
Strand : -
Note : residues 80 to 199 of 199 are 100.00 pct identical to residues 1 to 120 of 120 from GenPept : >gb|AAK00468.1| (AF200692) unknown [Shigella flexneri 2a]

DNA sequence : 
ATGCAAACTTATAACACCAATCCCGCTTACGAAATGGCTCCCCAGCTCCTGGAGCACTTTAACCAGCATCTGGATTCATT
ATTCGGGGTCTATTCGAAACTGTTACCGTTCAGAATGGATTTTGCTTACCGAAAAAACACCCTCAGCTACAGATGTGCCT
GCAGGTACGCCATGTGCGCGGAGATGCTGCAACTGATTAACGAGGTGGGAGAGAAACTGGTCGGGTATGCCTGGGTGATG
GAATATACAGAACGTAAAGGGCTTCACATTCATTTTGTGGGCTATCTGAACGGCCAGAGCCACAGGAGTTCGTATCTGGT
ATCCAGATTGATGGGAGATATCTGGAGGCGGGTTACCGAGGGTAATGGTTACTACCACTGGTGCCGGTTTAATAAAAATT
ATCCGGTAAACATTAACCACGTCATTCACTATTCAGATCACAAAGCGGTGAATGATTTACGCTATGCCATCAGCTACCTG
GCCAAACGGGAACAGAAAGAATGTGGCATCATCCTGAAATGCAGCGGGCTTCCTGAAAAAAGTAACCGGGGTCGACCACG
ACTGGACAGCCCCCTGCCGGGGATATGTGCTCTGGTGTAA

Protein sequence : 
MQTYNTNPAYEMAPQLLEHFNQHLDSLFGVYSKLLPFRMDFAYRKNTLSYRCACRYAMCAEMLQLINEVGEKLVGYAWVM
EYTERKGLHIHFVGYLNGQSHRSSYLVSRLMGDIWRRVTEGNGYYHWCRFNKNYPVNINHVIHYSDHKAVNDLRYAISYL
AKREQKECGIILKCSGLPEKSNRGRPRLDSPLPGICALV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2982 NP_708756.1 hypothetical protein Not tested SHI-1 Protein 1e-92 100
S3187 NP_838470.1 hypothetical protein Not tested SHI-1 Protein 1e-92 100
unnamed CAE85184.1 hypothetical protein Not tested PAI V 536 Protein 3e-83 95
Z1128 NP_286663.1 hypothetical protein Not tested TAI Protein 9e-58 64
Z1567 NP_287071.1 hypothetical protein Not tested TAI Protein 9e-58 64
unnamed AAL08430.1 unknown Not tested SRL Protein 1e-55 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S3187 NP_838470.1 hypothetical protein VFG0646 Protein 4e-93 100
S3187 NP_838470.1 hypothetical protein VFG1021 Protein 5e-56 61