Gene Information

Name : S4823 (S4823)
Accession : NP_838461.1
Strain : Shigella flexneri 2457T
Genome accession: NC_004741
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3051492 - 3052253 bp
Length : 762 bp
Strand : +
Note : residues 1 to 253 of 253 are 75.88 pct identical to residues 148 to 400 of 400 from NRprotein_Feb03 : >dbj|BAA77991.1| traF [Plasmid R64] dbj|BAB91674.1| 99 pct identical to gp:AB021078_83[TraF of plasmid ColIb-P9] [Salmonella typhimurium]

DNA sequence : 
ATGGTTAAATCACACGGCACCGTCAGTGTCGACGGTAAAGTCTCTGATGCTGACCTCACTTACCTGGAAGAGGTGGCAAA
CAGCACCGGGCAGGAGGTGGACAAAAGCCGCCTGACATCACAGGCCTGTGCCCGCACGGCACTGATCACTGATGTGGGTA
TTGCTCTGGCTACGGAACTGGAAACGGCCGGGCAGAAATGGTCTCTGGGCTTCCCCCCCAAATTCCAGCGCGTCGACCTG
TTCAACTACAACGTGCTGGTCAGAAATTATGACAGCAGCGCCTTCAAAGGCGACCGCTACCACAACACGAAAAATGGCAT
CAACGCCGACATCGGTGCCAGTACGGACCTGGATGACAACTGGACGCTGGGACTGGTCGCACAGAACCTGATCTCCCGTA
GTATTGAGACAAAAGAAGTGAACGGTATCACGGAAACCTTCAGGATCCGCCCGCAGGTGACGGCCGGTGTCTCCTGGCAC
AACGCGATGTTCACCACTGCATTTGATGTGGATCTGACCCCGGCCAGCGGTTTCACCTCCGACAGCAACCGTCAGTTTGC
CGCCATTGGCACAGAATTTAATGCCTGGAAATGGGCACAGCTGCGCGCCGGTTACCGTCAGAATCTGGCCGGTAACGACG
GCAGTGCATTCACGGCCGGGGTGGGGATCTCACCGTTTGATGTGGTTCACCTTGATGTTGCAGGCCTGATCGGCACGGAC
AACACTTACGGTGCGGTCGCACAGTTCCAGTTCACCTTCTGA

Protein sequence : 
MVKSHGTVSVDGKVSDADLTYLEEVANSTGQEVDKSRLTSQACARTALITDVGIALATELETAGQKWSLGFPPKFQRVDL
FNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTDLDDNWTLGLVAQNLISRSIETKEVNGITETFRIRPQVTAGVSWH
NAMFTTAFDVDLTPASGFTSDSNRQFAAIGTEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTD
NTYGAVAQFQFTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4823 NP_838461.1 hypothetical protein Not tested SHI-1 Protein 3e-112 100
SF2967 NP_708741.2 hypothetical protein Not tested SHI-1 Protein 3e-112 100
unnamed AAK00459.1 unknown Not tested SHI-1 Protein 1e-113 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S4823 NP_838461.1 hypothetical protein VFG0629 Protein 1e-112 100