Gene Information

Name : S0311 (S0311)
Accession : NP_836030.1
Strain : Shigella flexneri 2457T
Genome accession: NC_004741
Putative virulence/resistance : Unknown
Product : IS1 orfA
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3677
EC number : -
Position : 310382 - 310657 bp
Length : 276 bp
Strand : +
Note : residues 1 to 91 of 91 are 97.80 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri]

DNA sequence :
GTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGGTGCGTAACGGCAAAAGCACTGCCGGACA
TCTGCGCTATCTCTGCTCTCATTGCCGTAAAACATGGCAACTACAGTTCACTTACACCGCCTCTCAGCCCGGTAAGCACC
AGAAAATCATTGATATGGCCATGAATGGCGTCGGATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTT
TTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAA

Protein sequence :
MASISIRCPSCSATEGVVRNGKSTAGHLRYLCSHCRKTWQLQFTYTASQPGKHQKIIDMAMNGVGCRASARIMGVGLNTV
LRHLKNSGRSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4046 NP_839215.1 IS1 orfA Not tested SHI-2 Protein 6e-37 98
S4058 NP_839226.1 IS1 orfA Not tested SHI-2 Protein 6e-37 98
insA NP_709464.1 IS1 ORF1 Not tested SHI-2 Protein 1e-36 97
aec39 AAW51722.1 InsA Not tested AGI-3 Protein 8e-37 97
InsA (Tn1) CAJ77071.1 Transposase Not tested AbaR1 Protein 6e-36 92
insA ADD91745.1 transposase Not tested PAI-I AL862 Protein 6e-36 92
insA AEZ06026.1 InsA Not tested AbaR24 Protein 6e-36 92
EC042_4086 YP_006098369.1 transposase Not tested Tn2411 Protein 9e-36 92
EC042_4114 YP_006098398.1 transposase Not tested Tn2411 Protein 9e-36 92
insA NP_458737.1 insertion element IS1 protein Not tested SPI-7 Protein 9e-36 92