Gene Information

Name : S2182 (S2182)
Accession : NP_837624.1
Strain : Shigella flexneri 2457T
Genome accession: NC_004741
Putative virulence/resistance : Unknown
Product : IS629 orfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2064173 - 2064526 bp
Length : 354 bp
Strand : -
Note : residues 1 to 117 of 117 are 100.00 pct identical to residues 1 to 117 of 117 from GenPept : >gb|AAK18555.1|AF348706_244 (AF348706) IS629 orf [Shigella flexneri]

DNA sequence :
ATGCCACTGCTGGATAAGCTGCGTGAGCAGTACGGGGTCGGACCGGTATGCAGCGAACTGCATATTGCCCCGTCAACGTA
TTACCACTGTCAGCAACAGCGACATCATCCGGATAAACGCAGTGCCCGTGCGCAGCGCGATGACTGGCTGAAGAAAGAGA
TACAGCGCGTATACGATGAAAATCACAAGGTATACGGTGTAAAGTCTGGCGTCAGTTGTTACGGGAAGGTATCAGAGTGG
CCAGATGCACTGTGGCACGTCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTACGACCATC
AGCCGGAAAGCCGTTGCCGCAGGCGACCGCGTAA

Protein sequence :
MPLLDKLREQYGVGPVCSELHIAPSTYYHCQQQRHHPDKRSARAQRDDWLKKEIQRVYDENHKVYGVKSGVSCYGKVSEW
PDALWHVSWRLWDLPVFSGVKRSVRPSAGKPLPQATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAF09024.1 unknown Not tested SHI-O Protein 6e-51 99
tnpD AAD44737.1 TnpD Not tested SHI-2 Protein 2e-51 99
unnamed AAT48692.1 transposase R14 Not tested PAI I 4787 Protein 1e-29 65
c3595 NP_755470.1 transposase Not tested PAI I CFT073 Protein 2e-29 65
r14 AAC61721.1 transposase R14 Not tested PAI I CFT073 Protein 2e-29 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S2182 NP_837624.1 IS629 orfB VFG1716 Protein 5e-30 65