Gene Information

Name : S2009 (S2009)
Accession : NP_837496.1
Strain : Shigella flexneri 2457T
Genome accession: NC_004741
Putative virulence/resistance : Unknown
Product : IS629 orfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1932840 - 1933274 bp
Length : 435 bp
Strand : -
Note : residues 16 to 144 of 144 are 99.22 pct identical to residues 94 to 222 of 222 from GenPept : >gb|AAL72362.1| (AF386526) transposase [Shigella flexneri 2a]; partial

DNA sequence :
ATGTGGCGTTCATCATTGATGTGTTTGCCGGATACATCGTGGGGTGCCATGGAAACGACATTCGTGCTGGATGCACTGGA
GCAGGCGTTATGGGCCCGTCGACCGTCCGGCACGGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACA
CACAGCGGCTTAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGATGGCGGAGAGC
ATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACTGGCCACACTAAC
GTGGGTGGACTGGTATAACAATCGACGATTGCTGGAAAGGCTGGGCCATACTCCTCCGGCAGAAGCAGAAAAAGCTTATT
ATGCTTCCATCGGAAACGATGATCTGGCAGCCTGA

Protein sequence :
MWRSSLMCLPDTSWGAMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAES
INGLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKAYYASIGNDDLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
r15 AAC61720.1 putative transposase R15 Not tested PAI I CFT073 Protein 2e-50 94
unnamed AAT48693.1 unknown Not tested PAI I 4787 Protein 2e-50 94
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 1e-49 93

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
S2009 NP_837496.1 IS629 orfB VFG1715 Protein 3e-50 93