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Name : S1960 (S1960) Accession : NP_837461.1 Strain : Shigella flexneri 2457T Genome accession: NC_004741 Putative virulence/resistance : Unknown Product : IS629 orfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1899199 - 1899846 bp Length : 648 bp Strand : + Note : residues 1 to 215 of 215 are 99.06 pct identical to residues 8 to 222 of 222 from GenPept : >gb|AAL72361.1| (AF386526) transposase [Shigella flexneri 2a]; partial DNA sequence : GTGGCCAGATGCACTGTGGCACGTCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTACGAC CATCAGCCGGAAAGCCGTTGCCGCAGGCGACCGCGTAAACCGTCAGTTCGTGGCAGAACGACCTGACCAGCTGTGGGTGG CTGATTTTACTTACGTCAGCACATGGCGGGGCTTCGTCTATGTGGCGTTCATCATTGATGTGTTTGCCGGATACATCGTG GGGTGGCGGGTCTCATCGTCCATGGAAACGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCGACCGTC CGGCACGGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAGGAAGCCGGATTAC TGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGATGGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTA ATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACTGGCCACACTAACGTGGGTGGACTGGTATAACAATCGACG ATTGCTGGAAAGGCTGGGCCACATCCCTCCGGCAGAAGCAGAAAAAGCTTATTATGCTTCCATCGGAAACGATGATCTGG CAGCCTGA Protein sequence : MARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWRGFVYVAFIIDVFAGYIV GWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEV IHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHIPPAEAEKAYYASIGNDDLAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpC | AAD44736.1 | TnpC | Not tested | SHI-2 | Protein | 7e-91 | 100 |
| S4063 | NP_839232.1 | IS629 orfB | Not tested | SHI-2 | Protein | 4e-95 | 99 |
| unnamed | AAL67406.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 4e-94 | 99 |
| c5178 | NP_757026.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 6e-94 | 99 |
| unnamed | AAL67398.1 | putative transposase | Not tested | PAI II CFT073 | Protein | 4e-94 | 99 |
| Z4334 | NP_289559.1 | IS629 transposase | Not tested | OI-122 | Protein | 7e-94 | 98 |
| ECO111_3721 | YP_003236061.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 7e-93 | 98 |
| ECO111_3776 | YP_003236111.1 | putative IS629 transposase OrfB | Not tested | LEE | Protein | 7e-93 | 98 |
| IS629 | CAC37926.1 | transposase for IS629 | Not tested | LEE | Protein | 9e-91 | 97 |
| IS629 | CAI43821.1 | transposase for IS629 | Not tested | LEE | Protein | 9e-91 | 97 |
| IS629 | CAI43909.1 | transposase for IS629 1 | Not tested | LEE | Protein | 9e-91 | 97 |
| ECO103_3585 | YP_003223443.1 | IS629 transposase OrfB | Not tested | LEE | Protein | 7e-91 | 97 |
| c5213 | NP_757061.1 | transposase IS629 | Not tested | PAI II CFT073 | Protein | 9e-93 | 97 |
| Z1221 | NP_286756.1 | transposase | Not tested | TAI | Protein | 6e-91 | 96 |
| IS629 | CAI43840.1 | transposase for IS629 | Not tested | LEE | Protein | 3e-89 | 96 |
| Z1660 | NP_287162.1 | transposase for IS629 | Not tested | TAI | Protein | 5e-91 | 96 |
| APECO1_3499 | YP_854312.1 | transposase for IS629 | Not tested | PAI I APEC-O1 | Protein | 3e-92 | 95 |
| Z1198 | NP_286733.1 | transposase | Not tested | TAI | Protein | 2e-90 | 95 |
| Z1638 | NP_287141.1 | transposase | Not tested | TAI | Protein | 2e-90 | 95 |
| ORF_34 | AAZ04444.1 | putative IS629 transposase | Not tested | PAI I APEC-O1 | Protein | 2e-92 | 95 |
| unnamed | CAD42083.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 1e-89 | 94 |
| c3594 | NP_755469.1 | transposase | Not tested | PAI I CFT073 | Protein | 7e-71 | 93 |
| tnp7109-25 | YP_001800853.1 | transposase for insertion sequence | Not tested | Not named | Protein | 2e-39 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| S1960 | NP_837461.1 | IS629 orfB | VFG1602 | Protein | 5e-90 | 94 |
| S1960 | NP_837461.1 | IS629 orfB | VFG1715 | Protein | 2e-71 | 93 |
