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Name : S1716 (S1716) Accession : NP_837260.1 Strain : Shigella flexneri 2457T Genome accession: NC_004741 Putative virulence/resistance : Unknown Product : ISEhe3 orfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1659600 - 1660412 bp Length : 813 bp Strand : - Note : residues 1 to 270 of 270 are 95.92 pct identical to residues 10 to 279 of 279 from GenPept : >gb|AAG53988.1|AF327445_2 (AF327445) transposase B [Pantoea agglomerans] DNA sequence : GTGCTGGATGTTCATCCCAGTGGTTTTTACGCCTGGCTTCAGCAGCCGCATTCACAACGCCATCAGGCAGACCTGAGACT GACAGGACAGATTAAACAGTTCTGGCTGGAATCGGGATGCGTCTATGGTTATCGCAAAATCCATCTGGATCTGCGTGACA GCGGGCAACAGTGCGGAGTAAACAGAGTCTGGAGACTGATGAAACGTGTCGGAATAAAGGCTCAGGTCGGATACCGAAGC CCGCGGGCACGTAAAGGCGAGGCCAGTATCGTGTCACCCAACAGGCTCCAGCGACAGTTCAATCCGGATGCTCCTGATGA GCGTTGGGTAACGGACATAACCTACATCAGGACCCACGAAGGCTGGCTGTATCTTGCCGTTGTTGTTGATCTGTTCTCAC GCAAAATTATCGGCTGGTCCATGCAATCCCGGATGACAAAGGACATTGTCCTGAACGCACTGCTGATGGCTGTATGGCGG CGTAATCCCGAAAAACAGGTGCTGGTTCATTCGGATCAGGGCAGTCAGTACACAAGCCATGAGTGGCAGTCGTTCCTGAA ATCACACGGCCTGGAGGGTAGCATGAGCCGTCGCGGTAACTGCCATGATAATGCGGTTGCAGAAAGTTTTTTCCAGTTGT TGAAACGTGAACGGATAAAGAAAAAGATCTACGGAACGCGGGAAGAAGCCCGCAGTGATATTTTTGATTACATCGAAATG TTTTATAACAGTAAGCGTCGGCATGGTTCTAGCGAACAGATGTCACCGACAGAATATGAAAACCAGTATTATCAACGGCT CGGAAGTGTCTAG Protein sequence : MLDVHPSGFYAWLQQPHSQRHQADLRLTGQIKQFWLESGCVYGYRKIHLDLRDSGQQCGVNRVWRLMKRVGIKAQVGYRS PRARKGEASIVSPNRLQRQFNPDAPDERWVTDITYIRTHEGWLYLAVVVDLFSRKIIGWSMQSRMTKDIVLNALLMAVWR RNPEKQVLVHSDQGSQYTSHEWQSFLKSHGLEGSMSRRGNCHDNAVAESFFQLLKRERIKKKIYGTREEARSDIFDYIEM FYNSKRRHGSSEQMSPTEYENQYYQRLGSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL57519.1 | transposase 1 | Not tested | LEE | Protein | 5e-41 | 46 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 4e-43 | 45 |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 5e-44 | 45 |
| unnamed | AAL57581.1 | transposase 1 | Not tested | LEE | Protein | 9e-41 | 45 |
| ECO111_3732 | YP_003236068.1 | putative IS3 transposase InsF | Not tested | LEE | Protein | 4e-40 | 45 |
| ECs4537 | NP_312564.1 | hypothetical protein | Not tested | LEE | Protein | 1e-28 | 42 |
| unnamed | AAC31485.1 | L0006 | Not tested | LEE | Protein | 1e-28 | 42 |
| Z5089 | NP_290241.1 | transposase | Not tested | LEE | Protein | 1e-28 | 42 |
| aec65 | AAW51748.1 | Aec65 | Not tested | AGI-3 | Protein | 1e-29 | 42 |
| unnamed | ACU09432.1 | IS911 transposase orfB | Not tested | LEE | Protein | 1e-28 | 42 |
| unnamed | CAI43898.1 | putative transposase | Not tested | LEE | Protein | 1e-29 | 42 |
| l7094 | CAD33743.1 | ORF B protein | Not tested | PAI I 536 | Protein | 3e-29 | 42 |
| orfB | CAE85178.1 | OrfB protein, IS911 | Not tested | PAI V 536 | Protein | 3e-29 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| S1716 | NP_837260.1 | ISEhe3 orfB | VFG0785 | Protein | 6e-29 | 42 |
| S1716 | NP_837260.1 | ISEhe3 orfB | VFG1484 | Protein | 2e-29 | 42 |
