|
Name : S1329 (S1329) Accession : NP_836934.1 Strain : Shigella flexneri 2457T Genome accession: NC_004741 Putative virulence/resistance : Unknown Product : IS1 orfA Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3677 EC number : - Position : 1295404 - 1295679 bp Length : 276 bp Strand : - Note : residues 1 to 91 of 91 are 100.00 pct identical to residues 1 to 91 of 91 from GenPept : >gb|AAK18550.1|AF348706_239 (AF348706) iso-IS1 orfA [Shigella flexneri] DNA sequence : GTGGCTTCCATTTCCATCAGATGTCCTTCCTGCTCCGCTACTGAAGGCGTGGTGCGTAACGGCAAAAGCACTGCCGGACA TCAGCGCTATCTCTGCTCTCATTGCCGTAAAACATGGCAACTACAGTTCACTTACACCGCCTCTCAGCCCGGTACGCACC AGAAAATCATTGATATGGCCATGAATGGCGTCGGATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTT TTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAA Protein sequence : MASISIRCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTV LRHLKNSGRSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| S4046 | NP_839215.1 | IS1 orfA | Not tested | SHI-2 | Protein | 5e-38 | 100 |
| S4058 | NP_839226.1 | IS1 orfA | Not tested | SHI-2 | Protein | 5e-38 | 100 |
| aec39 | AAW51722.1 | InsA | Not tested | AGI-3 | Protein | 7e-38 | 99 |
| insA | NP_709464.1 | IS1 ORF1 | Not tested | SHI-2 | Protein | 8e-38 | 99 |
| InsA (Tn1) | CAJ77071.1 | Transposase | Not tested | AbaR1 | Protein | 6e-37 | 94 |
| insA | ADD91745.1 | transposase | Not tested | PAI-I AL862 | Protein | 6e-37 | 94 |
| EC042_4086 | YP_006098369.1 | transposase | Not tested | Tn2411 | Protein | 8e-37 | 94 |
| insA | AEZ06026.1 | InsA | Not tested | AbaR24 | Protein | 6e-37 | 94 |
| EC042_4114 | YP_006098398.1 | transposase | Not tested | Tn2411 | Protein | 8e-37 | 94 |
| insA | NP_458737.1 | insertion element IS1 protein | Not tested | SPI-7 | Protein | 8e-37 | 94 |
