|
Name : S1059 (S1059) Accession : NP_836698.1 Strain : Shigella flexneri 2457T Genome accession: NC_004741 Putative virulence/resistance : Unknown Product : IS1 orfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1662 EC number : - Position : 1042815 - 1043318 bp Length : 504 bp Strand : + Note : residues 1 to 167 of 167 are 89.82 pct identical to residues 1 to 167 of 167 from GenPept : >gb|AAK18365.1|AF348706_54 (AF348706) IS1 transposase [Shigella flexneri] DNA sequence : ATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGT AACCTCGCGCATACAACCGGGCAGTGATGTGATTGTCTGCGCTGAAATGGACGAACATTGGGGCTACGTCGGTGCTAAAT CACGTCAGCGCTGGCTGTTTTACGCGTATGACAGGATACGGAGGACGGTTGTGGCGCACGTCTTCGGTGAACGCACTCTG GCCACACTGGAGCGTCTTCTGAGCCTGCTGTCGGCCTTTGAGGTCGTGGTATGGATGACGGATGGCTGTCCGCTGTATGA ATCACGCCTGAAGGGAAAGCTGCACGTTATCAGCAAGCGTTACACTCAGCGCATTGAGCGACATAATCTGAATCTGAGAC AACATCTGGCAAGGCTGGGACGGAAGTCACTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAGGTCATCGGGCATTAT CTGAACATAAAACACTATCAGTAA Protein sequence : MSRQCTHYGRWPQHGFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEHWGYVGAKSRQRWLFYAYDRIRRTVVAHVFGERTL ATLERLLSLLSAFEVVVWMTDGCPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY LNIKHYQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpH | AAD44742.1 | TnpH | Not tested | SHI-2 | Protein | 1e-65 | 99 |
| S4059 | NP_839227.1 | IS1 orfB | Not tested | SHI-2 | Protein | 1e-65 | 99 |
| Z1192 | NP_286727.1 | IS1 protein InsB | Not tested | TAI | Protein | 7e-66 | 99 |
| Z1632 | NP_287135.1 | IS1 protein InsB | Not tested | TAI | Protein | 7e-66 | 99 |
| aec38 | AAW51721.1 | InsB | Not tested | AGI-3 | Protein | 1e-50 | 99 |
| insB | NP_709451.1 | IS1 ORF2 | Not tested | SHI-2 | Protein | 2e-65 | 98 |
| insB | NP_709463.1 | IS1 ORF2 | Not tested | SHI-2 | Protein | 3e-47 | 98 |
| insB | ADD91744.1 | transposase | Not tested | PAI-I AL862 | Protein | 9e-62 | 93 |
| EC042_4085 | YP_006098368.1 | transposase | Not tested | Tn2411 | Protein | 1e-61 | 89 |
| EC042_4113 | YP_006098397.1 | transposase | Not tested | Tn2411 | Protein | 1e-61 | 89 |
| insB | NP_458736.1 | insertion element IS1 protein InsB | Not tested | SPI-7 | Protein | 1e-61 | 89 |
| InsB (Tn1) | CAJ77072.1 | Transposase | Not tested | AbaR1 | Protein | 3e-59 | 88 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| S1059 | NP_836698.1 | IS1 orfB | VFG0612 | Protein | 6e-66 | 98 |
